RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 KRT222Q8N1A0 295 aa16.43■□□□□ 0.22
CCDC38-203ENST00000546803 LKAAEAR1Q8TD35 194 aa16.43■□□□□ 0.22
CCDC38-203ENST00000546803 DPYSL5Q9BPU6 564 aa16.43■□□□□ 0.22
CCDC38-203ENST00000546803 SCNM1Q9BWG6 230 aa16.43■□□□□ 0.22
CCDC38-203ENST00000546803 SYNDIG1Q9H7V2 258 aa16.43■□□□□ 0.22
CCDC38-203ENST00000546803 KLHL42Q9P2K6 505 aa16.43■□□□□ 0.22
CCDC38-203ENST00000546803 ANGPTL2Q9UKU9 493 aa16.43■□□□□ 0.22
CCDC38-203ENST00000546803 CNOT1A5YKK6 2376 aaKnown RBP16.43■□□□□ 0.22
CCDC38-203ENST00000546803 D6RAR5 112 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 TMX2-CTNND1H3BSU7 103 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 DUX1O43812 170 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 HAUS5O94927 633 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 SLCO2B1O94956 709 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 CPNE6O95741 557 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 TOP3BO95985 862 aaKnown RBP16.42■□□□□ 0.22
CCDC38-203ENST00000546803 CHRM3P20309 590 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 CD1CP29017 333 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 MAGEA4P43358 317 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 MPP1Q00013 466 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 HSPA14Q0VDF9 509 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 TARDBPQ13148 414 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCDC38-203ENST00000546803 CUL1Q13616 776 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 KRT33BQ14525 404 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 BRD3Q15059 726 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 AMZ1Q400G9 498 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 PLEKHS1Q5SXH7 462 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 PIM3Q86V86 326 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 ZNF761Q86XN6 746 aaPredicted RBP16.42■□□□□ 0.22
CCDC38-203ENST00000546803 SLC22A15Q8IZD6 547 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 IFT81Q8WYA0 676 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 TFGQ92734 400 aaPredicted RBP16.42■□□□□ 0.22
CCDC38-203ENST00000546803 KCNJ9Q92806 393 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 AHCYL2Q96HN2 611 aaKnown RBP16.42■□□□□ 0.22
CCDC38-203ENST00000546803 TMEM74Q96NL1 305 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 MVB12BQ9H7P6 319 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 LATS2Q9NRM7 1088 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 NSMCE4AQ9NXX6 385 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 KLK13Q9UKR3 277 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 MSRB2Q9Y3D2 182 aa16.42■□□□□ 0.22
CCDC38-203ENST00000546803 CFAP20Q9Y6A4 193 aaKnown RBP16.42■□□□□ 0.22
CCDC38-203ENST00000546803 PLXNB3Q9ULL4 1909 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 E5RI56 91 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 NIPSNAP2O75323 286 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 CSO75390 466 aaKnown RBP16.41■□□□□ 0.22
CCDC38-203ENST00000546803 SPAG6O75602 509 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 ACADLP28330 430 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 CLDN6P56747 220 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 ILF2Q12905 390 aaKnown RBP16.41■□□□□ 0.22
CCDC38-203ENST00000546803 GPR18Q14330 331 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 ISXQ2M1V0 245 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 MAP9Q49MG5 647 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 CNSTQ6PJW8 725 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 NAPRTQ6XQN6 538 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 C3orf62Q6ZUJ4 267 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 IFT20Q8IY31 132 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 CDKL2Q92772 493 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 AARSD1Q9BTE6 412 aaKnown RBP16.41■□□□□ 0.22
CCDC38-203ENST00000546803 TBC1D10AQ9BXI6 508 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 KIR3DX1Q9H7L2 352 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 ZFATQ9P243 1243 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 CORO1CQ9ULV4 474 aaPredicted RBP16.41■□□□□ 0.22
CCDC38-203ENST00000546803 CDYLQ9Y232 598 aa16.41■□□□□ 0.22
CCDC38-203ENST00000546803 PRAMEF33A0A0G2JMD5 474 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 FAM149AA5PLN7 773 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 UBXN7O94888 489 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 AHSGP02765 367 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 SPINK2P20155 84 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 GABRB3P28472 473 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 ATP5DP30049 168 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 SSTR1P30872 391 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 TTLL9Q3SXZ7 439 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 ZNF549Q6P9A3 640 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 KLHL35Q6PF15 583 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 WDR74Q6RFH5 385 aaPredicted RBP16.4■□□□□ 0.22
CCDC38-203ENST00000546803 USP53Q70EK8 1073 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 SLC26A11Q86WA9 606 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 RELL1Q8IUW5 271 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 C9orf72Q96LT7 481 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 FERD3LQ96RJ6 166 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 FMO2Q99518 471 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 ATXN7L1Q9ULK2 861 aaPredicted RBP16.4■□□□□ 0.22
CCDC38-203ENST00000546803 ASF1AQ9Y294 204 aa16.4■□□□□ 0.22
CCDC38-203ENST00000546803 TCRBV9S1A1TA0A576 114 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 CASC3O15234 703 aaKnown RBP16.39■□□□□ 0.21
CCDC38-203ENST00000546803 PROS1P07225 676 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 RHOXF2BP0C7M4 288 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 AMD1P17707 334 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 CCKBRP32239 447 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 PPM1FP49593 454 aaPredicted RBP16.39■□□□□ 0.21
CCDC38-203ENST00000546803 CSE1LP55060 971 aaKnown RBP16.39■□□□□ 0.21
CCDC38-203ENST00000546803 INHBCP55103 352 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 TUBB4BP68371 445 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 ZFP36L1Q07352 338 aaKnown RBP16.39■□□□□ 0.21
CCDC38-203ENST00000546803 GBX1Q14549 363 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 NKAIN2Q5VXU1 208 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 UGT3A1Q6NUS8 523 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 DUS1LQ6P1R4 473 aaKnown RBP16.39■□□□□ 0.21
CCDC38-203ENST00000546803 TMEM71Q6P5X7 295 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 CAPN12Q6ZSI9 719 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 TBC1D21Q8IYX1 336 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms