RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 CDYLQ9Y232 598 aa10.45□□□□□ -0.74
TMEM116-203ENST00000546537 PCDHGB6Q9Y5F9 930 aa10.45□□□□□ -0.74
TMEM116-203ENST00000546537 CFAP20Q9Y6A4 193 aaKnown RBP10.45□□□□□ -0.74
TMEM116-203ENST00000546537 PRRC2AP48634 2157 aaKnown RBP10.45□□□□□ -0.74
TMEM116-203ENST00000546537 MATN2O00339 956 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 SOCS6O14544 535 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 KLHL18O94889 574 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 PRKCSHP14314 528 aaPredicted RBP10.44□□□□□ -0.74
TMEM116-203ENST00000546537 MMP11P24347 488 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 PSMA2P25787 234 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 MST1P26927 711 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 PRDX3P30048 256 aaKnown RBP10.44□□□□□ -0.74
TMEM116-203ENST00000546537 MIPP30301 263 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 SOX5P35711 763 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 LMAN1P49257 510 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 RBPJQ06330 500 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 PRKAA1Q13131 559 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 XRCC4Q13426 336 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 GTF2H3Q13889 308 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 ZFYVE27Q5T4F4 411 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 C1orf189Q5VU69 101 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 FAAH2Q6GMR7 532 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 MEX3BQ6ZN04 569 aaKnown RBP10.44□□□□□ -0.74
TMEM116-203ENST00000546537 FAM83HQ6ZRV2 1179 aaPredicted RBP10.44□□□□□ -0.74
TMEM116-203ENST00000546537 LINC00696Q6ZRV3 163 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 GPR135Q8IZ08 494 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 CHDHQ8NE62 594 aaPredicted RBP10.44□□□□□ -0.74
TMEM116-203ENST00000546537 ANKRD20A12PQ8NF67 263 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 PROKR1Q8TCW9 393 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 ADAMTS18Q8TE60 1221 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 THOC3Q96J01 351 aaKnown RBP10.44□□□□□ -0.74
TMEM116-203ENST00000546537 VPS35Q96QK1 796 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 INSM2Q96T92 566 aaPredicted RBP10.44□□□□□ -0.74
TMEM116-203ENST00000546537 FOXC2Q99958 501 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 TUBGCP2Q9BSJ2 902 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 PITPNM3Q9BZ71 974 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 GANQ9H2C0 597 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 KIR3DX1Q9H7L2 352 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 RAD18Q9NS91 495 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 ABI3Q9P2A4 366 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 TNFRSF10DQ9UBN6 386 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 AP1M2Q9Y6Q5 423 aa10.44□□□□□ -0.74
TMEM116-203ENST00000546537 MAP1AP78559 2803 aaPredicted RBP10.43□□□□□ -0.74
TMEM116-203ENST00000546537 H3BRJ5 948 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 MAP3K7O43318 606 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 SLC19A2O60779 497 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 POP7O75817 140 aaKnown RBP10.43□□□□□ -0.74
TMEM116-203ENST00000546537 RNF8O76064 485 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 ESRRAP11474 423 aaPredicted RBP10.43□□□□□ -0.74
TMEM116-203ENST00000546537 HLA-DPA1P20036 260 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 DNAJA1P31689 397 aaKnown RBP10.43□□□□□ -0.74
TMEM116-203ENST00000546537 IST1P53990 364 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 CASP6P55212 293 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 JAM2P57087 298 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 PPP2R2AP63151 447 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 NIPAL4Q0D2K0 466 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 NFE2L1Q14494 772 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 SLC9A5Q14940 896 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 CAMK4Q16566 473 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 METRNLQ641Q3 311 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 CDHR3Q6ZTQ4 885 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 TMC3Q7Z5M5 1100 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 POLNQ7Z5Q5 900 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 LRRC49Q8IUZ0 686 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 OR4E2Q8NGC2 313 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 MAML1Q92585 1016 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 TMEM121Q9BTD3 319 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 NDC1Q9BTX1 674 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 REPIN1Q9BWE0 567 aaKnown RBP10.43□□□□□ -0.74
TMEM116-203ENST00000546537 DLL4Q9NR61 685 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 AMACRQ9UHK6 382 aa10.43□□□□□ -0.74
TMEM116-203ENST00000546537 DNMT3AQ9Y6K1 912 aaPredicted RBP10.43□□□□□ -0.74
TMEM116-203ENST00000546537 CPAMD8Q8IZJ3 1885 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 VPS13CQ709C8 3753 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 HCFC1P51610 2035 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 TRAV17A0A0B4J275 112 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 BHMG1C9JSJ3 638 aaPredicted RBP10.42□□□□□ -0.74
TMEM116-203ENST00000546537 OR2B3O76000 313 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 CRYABP02511 175 aaKnown RBP10.42□□□□□ -0.74
TMEM116-203ENST00000546537 FOSL1P15407 271 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 SERPINB6P35237 376 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 ARL4AP40617 200 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 ZNF165P49910 485 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 TNFSF10P50591 281 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 ARG2P78540 354 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 MAMLD1Q13495 774 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 DPYSL2Q16555 572 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 C3AR1Q16581 482 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 LONRF1Q17RB8 773 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 NKAIN1Q4KMZ8 207 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 KIRREL2Q6UWL6 708 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 MCOLN2Q8IZK6 566 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 DNAJB8Q8NHS0 232 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 BRSK1Q8TDC3 778 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 C12orf66Q96MD2 445 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 TTC25Q96NG3 672 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 CSPG4P5Q96PW8 444 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 MDFIQ99750 246 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 ADGRE3Q9BY15 652 aa10.42□□□□□ -0.74
TMEM116-203ENST00000546537 WWP1Q9H0M0 922 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms