RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 LDLRAP1Q5SW96 308 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 GPRC6AQ5T6X5 926 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 STEAP4Q687X5 459 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 KCTD16Q68DU8 428 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ZNF470Q6ECI4 717 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 IL27RAQ6UWB1 636 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 SNX20Q7Z614 316 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 THAP5Q7Z6K1 395 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ATG4DQ86TL0 474 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 TMEM135Q86UB9 458 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 SPATS2Q86XZ4 545 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 DCP2Q8IU60 420 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 IGDCC3Q8IVU1 814 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 IFT20Q8IY31 132 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 GSPT2Q8IYD1 628 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 PIANPQ8IYJ0 282 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ZBED8Q8IZ13 594 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 NXPE1Q8N323 547 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 OTUD6BQ8N6M0 293 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 FBXO36Q8NEA4 188 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 OR56A4Q8NGH8 313 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 OR6P1Q8NGX9 317 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 GDAP1Q8TB36 358 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 BTN2A2Q8WVV5 523 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 IFT81Q8WYA0 676 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 OR1E3Q8WZA6 343 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 HDAC10Q969S8 669 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ULK4Q96C45 1275 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 CFAP36Q96G28 342 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 CDKN2AIPNLQ96HQ2 116 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 SIGLEC10Q96LC7 697 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 TBATAQ96M53 351 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 EBNA1BP2Q99848 306 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 KRTAP4-12Q9BQ66 201 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 DPH2Q9BQC3 489 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 EDEM2Q9BV94 578 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 GTPBP2Q9BX10 602 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 LGR4Q9BXB1 951 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 FOXP3Q9BZS1 431 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ASB8Q9H765 288 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ERVMER34-1Q9H9K5 563 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ARFGAP3Q9NP61 516 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 SAYSD1Q9NPB0 183 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 PARD6AQ9NPB6 346 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 SEMA3GQ9NS98 782 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 SEMA4GQ9NTN9 838 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 CATSPERZQ9NTU4 200 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 DNAJC28Q9NX36 388 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 IL1RAPL1Q9NZN1 696 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 VPS18Q9P253 973 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 APOBEC3BQ9UH17 382 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 TMPRSS11EQ9UL52 423 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 CNOT6Q9ULM6 557 aaKnown RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 SLC17A4Q9Y2C5 497 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 CORINQ9Y5Q5 1042 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ST14Q9Y5Y6 855 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 TEX264Q9Y6I9 313 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 ASXL3Q9C0F0 2248 aa6.25□□□□□ -1.41
PRKDC-211ENST00000546304 COL5A1P20908 1838 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-211ENST00000546304 IGLV3-16A0A075B6K0 115 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 MAGEB16A2A368 324 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 AGAP14A8MT82 685 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 GPR89AB7ZAQ6 455 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 GOLGA8KD6RF30 607 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 GOLGA8TH3BQL2 631 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 TNFRSF10CO14798 259 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 YKT6O15498 198 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 FOXD2O60548 495 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-211ENST00000546304 UGT1A9O60656 530 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 SLC25A14O95258 325 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-211ENST00000546304 RASGRP1O95267 797 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 VAPBO95292 243 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 IVLP07476 585 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 GPR89BP0CG08 455 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 PRSS56P0CW18 603 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 ZNF16P17020 682 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-211ENST00000546304 UGT1A6P19224 532 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 OGNP20774 298 aaKnown RBP6.24□□□□□ -1.41
PRKDC-211ENST00000546304 UGT1A1P22309 533 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 UGT1A4P22310 534 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 ACRV1P26436 265 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 TNFRSF8P28908 595 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 EPHA8P29322 1005 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-211ENST00000546304 CA5AP35218 305 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 UGT1A3P35503 534 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 UGT1A5P35504 534 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 ARCN1P48444 511 aaKnown RBP6.24□□□□□ -1.41
PRKDC-211ENST00000546304 ARRB1P49407 418 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-211ENST00000546304 ATXN3P54252 364 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-211ENST00000546304 SRP54P61011 504 aaKnown RBP6.24□□□□□ -1.41
PRKDC-211ENST00000546304 IRX4P78413 519 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 PPARDQ03181 441 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 EIF2B5Q13144 721 aaKnown RBP6.24□□□□□ -1.41
PRKDC-211ENST00000546304 GTF2H3Q13889 308 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 MPP2Q14168 576 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 ITIH4Q14624 930 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 LONRF1Q17RB8 773 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 TYSND1Q2T9J0 566 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 HLA-BQ31612 363 aa6.24□□□□□ -1.41
PRKDC-211ENST00000546304 AASDHQ4L235 1098 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms