RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 COL27A1Q8IZC6 1860 aaPredicted RBP20.02■□□□□ 0.79
HMGA2-211ENST00000545998 PRAMEF33A0A0G2JMD5 474 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 CXorf49A8MYA2 514 aaPredicted RBP20.01■□□□□ 0.79
HMGA2-211ENST00000545998 KPNA5O15131 536 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 CASC3O15234 703 aaKnown RBP20.01■□□□□ 0.79
HMGA2-211ENST00000545998 PIAS1O75925 651 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 SLCO2B1O94956 709 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 VIPP01282 170 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 APOA4P06727 396 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 CHRM3P20309 590 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 ABCG1P45844 678 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 GPR3P46089 330 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 CLCN7P51798 805 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 CSE1LP55060 971 aaKnown RBP20.01■□□□□ 0.79
HMGA2-211ENST00000545998 HSPA14Q0VDF9 509 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 DHRS13Q6UX07 377 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 OTOAQ7RTW8 1153 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 SPRED1Q7Z699 444 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 VRK3Q8IV63 474 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 Q8N9G6 341 aaPredicted RBP20.01■□□□□ 0.79
HMGA2-211ENST00000545998 FBF1Q8TES7 1133 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 ADAMTS14Q8WXS8 1223 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 KCNJ9Q92806 393 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 SH3KBP1Q96B97 665 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 FAM136AQ96C01 138 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 UCK1Q9HA47 277 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 IMP3Q9NV31 184 aaKnown RBP20.01■□□□□ 0.79
HMGA2-211ENST00000545998 NSMCE4AQ9NXX6 385 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 NCOR2Q9Y618 2525 aa20.01■□□□□ 0.79
HMGA2-211ENST00000545998 E5RI56 91 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 OPA1O60313 960 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 ACADLP28330 430 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 TNFRSF8P28908 595 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 STX2P32856 288 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 OR1D5P58170 312 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 INSM1Q01101 510 aaPredicted RBP20■□□□□ 0.79
HMGA2-211ENST00000545998 GBX1Q14549 363 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 TMED2Q15363 201 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 PLEKHS1Q5SXH7 462 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 UBAP2Q5T6F2 1119 aaKnown RBP20■□□□□ 0.79
HMGA2-211ENST00000545998 STRA8Q7Z7C7 330 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 SLC22A15Q8IZD6 547 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 CDKL2Q92772 493 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 SLC38A3Q99624 504 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 MCMBPQ9BTE3 642 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 CORO1CQ9ULV4 474 aaPredicted RBP20■□□□□ 0.79
HMGA2-211ENST00000545998 IFRD1O00458 451 aaPredicted RBP20■□□□□ 0.79
HMGA2-211ENST00000545998 B4GAT1O43505 415 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 MYBL2P10244 700 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 CCL7P80098 99 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 TIAL1Q01085 375 aaKnown RBP eCLIP20■□□□□ 0.79
HMGA2-211ENST00000545998 SLMAPQ14BN4 828 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 RBM20Q5T481 1227 aaKnown RBP20■□□□□ 0.79
HMGA2-211ENST00000545998 DUS1LQ6P1R4 473 aaKnown RBP20■□□□□ 0.79
HMGA2-211ENST00000545998 TMEM26Q6ZUK4 368 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 RAB44Q7Z6P3 723 aaPredicted RBP20■□□□□ 0.79
HMGA2-211ENST00000545998 ZNF761Q86XN6 746 aaPredicted RBP20■□□□□ 0.79
HMGA2-211ENST00000545998 RBM12BQ8IXT5 1001 aaKnown RBP20■□□□□ 0.79
HMGA2-211ENST00000545998 NDNQ99608 321 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 LDHAL6BQ9BYZ2 381 aaPredicted RBP20■□□□□ 0.79
HMGA2-211ENST00000545998 ABCG4Q9H172 646 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 HEBP2Q9Y5Z4 205 aa20■□□□□ 0.79
HMGA2-211ENST00000545998 CEP295Q9C0D2 2601 aa19.99■□□□□ 0.79
HMGA2-211ENST00000545998 NTN3O00634 580 aaPredicted RBP19.99■□□□□ 0.79
HMGA2-211ENST00000545998 FAM153BP0C7A2 387 aa19.99■□□□□ 0.79
HMGA2-211ENST00000545998 ALDH4A1P30038 563 aa19.99■□□□□ 0.79
HMGA2-211ENST00000545998 GPR18Q14330 331 aa19.99■□□□□ 0.79
HMGA2-211ENST00000545998 KBTBD12Q3ZCT8 623 aa19.99■□□□□ 0.79
HMGA2-211ENST00000545998 FAM153CQ494X1 144 aa19.99■□□□□ 0.79
HMGA2-211ENST00000545998 ZC3HC1Q86WB0 502 aaKnown RBP19.99■□□□□ 0.79
HMGA2-211ENST00000545998 GSPT2Q8IYD1 628 aaKnown RBP19.99■□□□□ 0.79
HMGA2-211ENST00000545998 ZBTB2Q8N680 514 aa19.99■□□□□ 0.79
HMGA2-211ENST00000545998 GIMAP7Q8NHV1 300 aa19.99■□□□□ 0.79
HMGA2-211ENST00000545998 WDR48Q8TAF3 677 aa19.99■□□□□ 0.79
HMGA2-211ENST00000545998 TFGQ92734 400 aaPredicted RBP19.99■□□□□ 0.79
HMGA2-211ENST00000545998 SLC30A3Q99726 388 aa19.99■□□□□ 0.79
HMGA2-211ENST00000545998 LRRN3Q9H3W5 708 aa19.99■□□□□ 0.79
HMGA2-211ENST00000545998 KLHL42Q9P2K6 505 aa19.99■□□□□ 0.79
HMGA2-211ENST00000545998 A0A1W2PQM1 296 aa19.98■□□□□ 0.79
HMGA2-211ENST00000545998 LILRA5A6NI73 299 aa19.98■□□□□ 0.79
HMGA2-211ENST00000545998 RPLP0P05388 317 aaKnown RBP19.98■□□□□ 0.79
HMGA2-211ENST00000545998 SIDT2Q8NBJ9 832 aaKnown RBP19.98■□□□□ 0.79
HMGA2-211ENST00000545998 ZFPM2Q8WW38 1151 aa19.98■□□□□ 0.79
HMGA2-211ENST00000545998 GPR21Q99679 349 aa19.98■□□□□ 0.79
HMGA2-211ENST00000545998 FUT8Q9BYC5 575 aa19.98■□□□□ 0.79
HMGA2-211ENST00000545998 KCNK4Q9NYG8 393 aa19.98■□□□□ 0.79
HMGA2-211ENST00000545998 DHRS7Q9Y394 339 aa19.98■□□□□ 0.79
HMGA2-211ENST00000545998 COLEC10Q9Y6Z7 277 aa19.98■□□□□ 0.79
HMGA2-211ENST00000545998 IGHV1OR21-1A0A087WYE8 117 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 ZW10O43264 779 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 VPS26AO75436 327 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 CD9P21926 228 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 ATP5DP30049 168 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 PHBP35232 272 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 EPHA4P54764 986 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 CDKN2DP55273 166 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 CDCP2Q5VXM1 449 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 CD200R1Q8TD46 325 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 ATXN7L3BQ96GX2 97 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 CPNE1Q99829 537 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms