RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 NAB1Q13506 487 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 MAPK11Q15759 364 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 CTC1Q2NKJ3 1217 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 PLEKHG6Q3KR16 790 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 ARSIQ5FYB1 569 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 ATXN7L2Q5T6C5 722 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 TMEM173Q86WV6 379 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 ANKLE1Q8NAG6 615 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 FBXO15Q8NCQ5 510 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 GATA6Q92908 595 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 ZFRQ96KR1 1074 aaKnown RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 PPP3R2Q96LZ3 170 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 SEPHS2Q99611 448 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 BCL2L14Q9BZR8 327 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 TPK1Q9H3S4 243 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 PIGVQ9NUD9 493 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 RSL24D1Q9UHA3 163 aaKnown RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 H3BSA7 217 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 INSIG1O15503 277 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 RGS5O15539 181 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 HNRNPA1P09651 372 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 LBPP18428 481 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 NR4A1P22736 598 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 HTR7P34969 479 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 IST1P53990 364 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 RHBDF2Q6PJF5 856 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 BNC2Q6ZN30 1099 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 BBS12Q6ZW61 710 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 BEND5Q7L4P6 421 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 KBTBD6Q86V97 674 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 FNIP1Q8TF40 1166 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 FOXJ1Q92949 421 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 HLA-CQ95604 372 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 UTP4Q969X6 686 aaKnown RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 PPCDCQ96CD2 204 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 CASD1Q96PB1 797 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 CSPG4P5Q96PW8 444 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 KCTD15Q96SI1 283 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 CCDC28BQ9BUN5 200 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 SLITRK2Q9H156 845 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 PNPLA8Q9NP80 782 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 SEMA3GQ9NS98 782 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 FAIMQ9NVQ4 179 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 PIAS3Q9Y6X2 628 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 OR1F1O43749 312 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 TNFAIP8O95379 198 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 PABPC4LP0CB38 370 aaKnown RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 ZNF8P17098 575 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 PRKACBP22694 351 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 RYKP34925 604 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 CSKP41240 450 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 SEPHS1P49903 392 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 ZNF155Q12901 538 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 FAM98BQ52LJ0 330 aaKnown RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 NEK5Q6P3R8 708 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 ALKAL1Q6UXT8 129 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 POLNQ7Z5Q5 900 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 GPR141Q7Z602 305 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 GPR180Q86V85 440 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 GSTCDQ8NEC7 633 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 SLC9A6Q92581 669 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 LDAHQ9H6V9 325 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 ANKHQ9HCJ1 492 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 LRRC4CQ9HCJ2 640 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 VWA7Q9Y334 891 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 SPEF1Q9Y4P9 236 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 CLCA3PQ9Y6N3 262 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 PLXNB2O15031 1838 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 FSCN2O14926 492 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 BIRC5O15392 142 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 SERPINB7O75635 380 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 FAM58BPP0C7Q3 252 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 L1CAMP32004 1257 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 NRLP54845 237 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 STXBP1P61764 594 aaKnown RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 TRMT5Q32P41 509 aaKnown RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 CCNYL2Q5T2Q4 361 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ENDOVQ8N8Q3 282 aaKnown RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ATOH1Q92858 354 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 CYP2S1Q96SQ9 504 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 GPR174Q9BXC1 333 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ADAM7Q9H2U9 754 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 SUV39H2Q9H5I1 410 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ARL8BQ9NVJ2 186 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 GIN1Q9NXP7 522 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 DUSP12Q9UNI6 340 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 SNX13Q9Y5W8 968 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 STON1Q9Y6Q2 735 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 GVINP1Q7Z2Y8 2422 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 PSMD11O00231 422 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 GMFGO60234 142 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 PIGNO95427 931 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 BGNP21810 368 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 MLLT3P42568 568 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 GSSP48637 474 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 PSMD4P55036 377 aaKnown RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 DSC2Q02487 901 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms