RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-233ENST00000545720 HM13Q8TCT9 377 aa23.15■■□□□ 1.3
RAP1B-233ENST00000545720 ZNF501Q96CX3 271 aaPredicted RBP23.15■■□□□ 1.3
RAP1B-233ENST00000545720 LINC00615Q96LM1 132 aaPredicted RBP23.15■■□□□ 1.3
RAP1B-233ENST00000545720 TLR10Q9BXR5 811 aa23.15■■□□□ 1.3
RAP1B-233ENST00000545720 FAM96AQ9H5X1 160 aa23.15■■□□□ 1.3
RAP1B-233ENST00000545720 KCND1Q9NSA2 647 aa23.15■■□□□ 1.3
RAP1B-233ENST00000545720 AAR2Q9Y312 384 aaKnown RBP23.15■■□□□ 1.3
RAP1B-233ENST00000545720 COLEC10Q9Y6Z7 277 aa23.15■■□□□ 1.3
RAP1B-233ENST00000545720 USP9YO00507 2555 aaPredicted RBP23.15■■□□□ 1.3
RAP1B-233ENST00000545720 SPTAN1Q13813 2472 aaKnown RBP23.15■■□□□ 1.3
RAP1B-233ENST00000545720 KCNN4O15554 427 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 CRTAMO95727 393 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 PYGMP11217 842 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 CTNNA2P26232 953 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 NDUFS1P28331 727 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 PRLHRP49683 370 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 ZNF140P52738 457 aaPredicted RBP23.14■■□□□ 1.29
RAP1B-233ENST00000545720 EIF3EP60228 445 aaKnown RBP23.14■■□□□ 1.29
RAP1B-233ENST00000545720 COPS2P61201 443 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 CHAF1BQ13112 559 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 PRKAA1Q13131 559 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 CAPRIN2Q6IMN6 1127 aaKnown RBP23.14■■□□□ 1.29
RAP1B-233ENST00000545720 CARFQ8N187 725 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 NXPE1Q8N323 547 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 CCDC110Q8TBZ0 833 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 ULK4Q96C45 1275 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 BTRCQ9Y297 605 aa23.14■■□□□ 1.29
RAP1B-233ENST00000545720 SPTBN1Q01082 2364 aaKnown RBP23.14■■□□□ 1.29
RAP1B-233ENST00000545720 CLEC18AA5D8T8 446 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 AGAP14A8MT82 685 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 CCL22O00626 93 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 PJA2O43164 708 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 STK10O94804 968 aaKnown RBP23.13■■□□□ 1.29
RAP1B-233ENST00000545720 RBP3P10745 1247 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 ITGALP20701 1170 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 CDH3P22223 829 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 CTNNA1P35221 906 aaKnown RBP23.13■■□□□ 1.29
RAP1B-233ENST00000545720 LAMB3Q13751 1172 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 PRAMEF17Q5VTA0 474 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 DARS2Q6PI48 645 aaKnown RBP23.13■■□□□ 1.29
RAP1B-233ENST00000545720 CLEC18BQ6UXF7 455 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 SLC38A9Q8NBW4 561 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 CLEC18CQ8NCF0 446 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 OR8K5Q8NH50 307 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 THAP4Q8WY91 577 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 COPS8Q99627 209 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 CCM2Q9BSQ5 444 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 OSBPL8Q9BZF1 889 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 CHST8Q9H2A9 424 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 FANCEQ9HB96 536 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 POMT2Q9UKY4 750 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 FARSAQ9Y285 508 aaKnown RBP23.13■■□□□ 1.29
RAP1B-233ENST00000545720 HEBP2Q9Y5Z4 205 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 SHANK1Q9Y566 2161 aa23.13■■□□□ 1.29
RAP1B-233ENST00000545720 GSAPA4D1B5 854 aa23.12■■□□□ 1.29
RAP1B-233ENST00000545720 SLC9B1P1A6NJY1 282 aa23.12■■□□□ 1.29
RAP1B-233ENST00000545720 CFAP99D6REC4 459 aa23.12■■□□□ 1.29
RAP1B-233ENST00000545720 UTP20O75691 2785 aaKnown RBP23.12■■□□□ 1.29
RAP1B-233ENST00000545720 MSLNQ13421 630 aaPredicted RBP23.12■■□□□ 1.29
RAP1B-233ENST00000545720 SPARCL1Q14515 664 aa23.12■■□□□ 1.29
RAP1B-233ENST00000545720 ATCAYQ86WG3 371 aa23.12■■□□□ 1.29
RAP1B-233ENST00000545720 CCDC170Q8IYT3 715 aa23.12■■□□□ 1.29
RAP1B-233ENST00000545720 ACVR1CQ8NER5 493 aa23.12■■□□□ 1.29
RAP1B-233ENST00000545720 SPATA13Q96N96 652 aa23.12■■□□□ 1.29
RAP1B-233ENST00000545720 TBL1YQ9BQ87 522 aa23.12■■□□□ 1.29
RAP1B-233ENST00000545720 SRMSQ9H3Y6 488 aa23.12■■□□□ 1.29
RAP1B-233ENST00000545720 LUC7LQ9NQ29 371 aaKnown RBP23.12■■□□□ 1.29
RAP1B-233ENST00000545720 LATS2Q9NRM7 1088 aa23.12■■□□□ 1.29
RAP1B-233ENST00000545720 PCDHA3Q9Y5H8 950 aa23.12■■□□□ 1.29
RAP1B-233ENST00000545720 PRRC2CQ9Y520 2896 aaKnown RBP23.11■■□□□ 1.29
RAP1B-233ENST00000545720 CCDC66A2RUB6 948 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 ARGFXA6NJG6 315 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 KLK3P07288 261 aaPredicted RBP23.11■■□□□ 1.29
RAP1B-233ENST00000545720 ATP1B2P14415 290 aaPredicted RBP23.11■■□□□ 1.29
RAP1B-233ENST00000545720 CYLC1P35663 651 aaPredicted RBP23.11■■□□□ 1.29
RAP1B-233ENST00000545720 ABRQ12979 859 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 ZNF517Q6ZMY9 492 aaPredicted RBP23.11■■□□□ 1.29
RAP1B-233ENST00000545720 MICALCLQ6ZW33 695 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 SNX20Q7Z614 316 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 FAM26EQ8N5C1 309 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 LCN9Q8WX39 176 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 FERD3LQ96RJ6 166 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 SLC25A23Q9BV35 468 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 TRIM5Q9C035 493 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 COG4Q9H9E3 785 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 C1GALT1Q9NS00 363 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 EFR3BQ9Y2G0 817 aa23.11■■□□□ 1.29
RAP1B-233ENST00000545720 ICE1Q9Y2F5 2266 aa23.1■■□□□ 1.29
RAP1B-233ENST00000545720 MATN2O00339 956 aa23.1■■□□□ 1.29
RAP1B-233ENST00000545720 MC4RP32245 332 aa23.1■■□□□ 1.29
RAP1B-233ENST00000545720 HADHAP40939 763 aa23.1■■□□□ 1.29
RAP1B-233ENST00000545720 CD97P48960 835 aa23.1■■□□□ 1.29
RAP1B-233ENST00000545720 PGDP52209 483 aa23.1■■□□□ 1.29
RAP1B-233ENST00000545720 GSDMDP57764 484 aa23.1■■□□□ 1.29
RAP1B-233ENST00000545720 IZUMO3Q5VZ72 239 aa23.1■■□□□ 1.29
RAP1B-233ENST00000545720 DENND5AQ6IQ26 1287 aa23.1■■□□□ 1.29
RAP1B-233ENST00000545720 LCN10Q6JVE6 187 aa23.1■■□□□ 1.29
RAP1B-233ENST00000545720 HEXDCQ8WVB3 486 aa23.1■■□□□ 1.29
RAP1B-233ENST00000545720 CPT1BQ92523 772 aa23.1■■□□□ 1.29
RAP1B-233ENST00000545720 CLIP3Q96DZ5 547 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms