RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 PIK3CBP42338 1070 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 PIK3R6Q5UE93 754 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 PIGXQ8TBF5 258 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 EBF2Q9HAK2 575 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 NMUR1Q9HB89 426 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 PIGVQ9NUD9 493 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 A8MT66 165 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 PAPSS2O95340 614 aaPredicted RBP12.34□□□□□ -0.43
COL4A6-209ENST00000545689 PTPN2P17706 415 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 KHKP50053 298 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 SYPL2Q5VXT5 272 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 CDH24Q86UP0 819 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 OR10A6Q8NH74 314 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 VRTNQ9H8Y1 702 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 SMURF2Q9HAU4 748 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 SCML2Q9UQR0 700 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 SLC30A4O14863 429 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 OMPP47874 163 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 PRR5P85299 388 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 CAP1Q01518 475 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 SLC9A5Q14940 896 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 SNAPC1Q16533 368 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 ZC3HC1Q86WB0 502 aaKnown RBP12.34□□□□□ -0.43
COL4A6-209ENST00000545689 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 C7orf43Q8WVR3 580 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 SEC14L1Q92503 715 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 GPATCH1Q9BRR8 931 aaKnown RBP12.34□□□□□ -0.43
COL4A6-209ENST00000545689 RETREG1Q9H6L5 497 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 NECTIN3Q9NQS3 549 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 PRORSD1PA6NEY8 169 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 STBD1O95210 358 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 DHFRP00374 187 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 GNAZP19086 355 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 KCTD8Q6ZWB6 473 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 KAT8Q9H7Z6 458 aaKnown RBP12.34□□□□□ -0.43
COL4A6-209ENST00000545689 MAGEE1Q9HCI5 957 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 TUBA8Q9NY65 449 aaPredicted RBP12.34□□□□□ -0.43
COL4A6-209ENST00000545689 TMED5Q9Y3A6 229 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 CPQQ9Y646 472 aa12.34□□□□□ -0.43
COL4A6-209ENST00000545689 PRPS1L1P21108 318 aa12.33□□□□□ -0.43
COL4A6-209ENST00000545689 DNAJB13P59910 316 aa12.33□□□□□ -0.43
COL4A6-209ENST00000545689 STXBP1P61764 594 aaKnown RBP12.33□□□□□ -0.43
COL4A6-209ENST00000545689 GAD2Q05329 585 aa12.33□□□□□ -0.43
COL4A6-209ENST00000545689 ARL5AQ9Y689 179 aa12.33□□□□□ -0.43
COL4A6-209ENST00000545689 COL2A1P02458 1487 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-209ENST00000545689 FAM149AA5PLN7 773 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 CXorf49A8MYA2 514 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-209ENST00000545689 FAM189A1O60320 539 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 KRT77Q7Z794 578 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 GALNT13Q8IUC8 556 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 VANGL1Q8TAA9 524 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-209ENST00000545689 PIGUQ9H490 435 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 ZNF99A8MXY4 864 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-209ENST00000545689 PSMD11O00231 422 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 PI15O43692 258 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 ANXA8P13928 327 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 CD247P20963 164 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 OGDHQ02218 1023 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 MERTKQ12866 999 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 C6orf89Q6UWU4 347 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 CIR1Q86X95 450 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-209ENST00000545689 TMEM192Q8IY95 271 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 TTLQ8NG68 377 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 TWNKQ96RR1 684 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 MIPEPQ99797 713 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 KIFC1Q9BW19 673 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 TNKS2Q9H2K2 1166 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 MKS1Q9NXB0 559 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 ZDHHC3Q9NYG2 299 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 PHF11Q9UIL8 331 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 CLDN25C9JDP6 229 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 ITM2AO43736 263 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 DAG1Q14118 895 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 FAM174BQ3ZCQ3 159 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 PLPP4Q5VZY2 271 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 FAM43BQ6ZT52 329 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-209ENST00000545689 CYP2U1Q7Z449 544 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 RANBP3LQ86VV4 465 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-209ENST00000545689 OXR1Q8N573 874 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 ACSS2Q9NR19 701 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 FBXL21Q9UKT6 434 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 MAP4K5Q9Y4K4 846 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 NR2E3Q9Y5X4 410 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 FFAR2O15552 330 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 LDOC1O95751 146 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-209ENST00000545689 PTPN5P54829 565 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 CARD16Q5EG05 197 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 USP43Q70EL4 1123 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 C9orf43Q8TAL5 461 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-209ENST00000545689 FAR1Q8WVX9 515 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 RAD51AP1Q96B01 352 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 C1GALT1C1Q96EU7 318 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 ATG10Q9H0Y0 220 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 RASSF1Q9NS23 344 aa12.33□□□□□ -0.44
COL4A6-209ENST00000545689 MTTPP55157 894 aa12.32□□□□□ -0.44
COL4A6-209ENST00000545689 AP1S2P56377 157 aa12.32□□□□□ -0.44
COL4A6-209ENST00000545689 SF1Q15637 639 aaKnown RBP12.32□□□□□ -0.44
COL4A6-209ENST00000545689 TYSND1Q2T9J0 566 aa12.32□□□□□ -0.44
COL4A6-209ENST00000545689 PLEKHG4Q58EX7 1191 aa12.32□□□□□ -0.44
COL4A6-209ENST00000545689 SIRPB2Q5JXA9 342 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms