RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 VAPBO95292 243 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 PREPP48147 710 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 LEPRP48357 1165 aaKnown RBP15.34■□□□□ 0.05
CCDC78-216ENST00000544996 TMPRSS3P57727 454 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 ZNF658BQ4V348 819 aaPredicted RBP15.34■□□□□ 0.05
CCDC78-216ENST00000544996 SYTL3Q4VX76 610 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 ANKRD22Q5VYY1 191 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 MRNIPQ6NTE8 343 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 DUS1LQ6P1R4 473 aaKnown RBP15.34■□□□□ 0.05
CCDC78-216ENST00000544996 FAM92BQ6ZTR7 304 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 OOSP2Q86WS3 158 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 JPH3Q8WXH2 748 aaPredicted RBP15.34■□□□□ 0.05
CCDC78-216ENST00000544996 TFGQ92734 400 aaPredicted RBP15.34■□□□□ 0.05
CCDC78-216ENST00000544996 MFSD3Q96ES6 412 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 CAPZA3Q96KX2 299 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 MVB12BQ9H7P6 319 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 FBXO8Q9NRD0 319 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 HRASLS2Q9NWW9 162 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 FOXJ2Q9P0K8 574 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 ZZEF1O43149 2961 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 OR5K3A6NET4 321 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 STMND1H3BQB6 276 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 GOLGA8MH3BSY2 632 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 PRMT5O14744 637 aaPredicted RBP15.33■□□□□ 0.04
CCDC78-216ENST00000544996 NDUFS3O75489 264 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 TMEM63AO94886 807 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 LIPCP11150 499 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 PDHA2P29803 388 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 PAFAH1B1P43034 410 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 MC2RQ01718 297 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 CLN3Q13286 438 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 BOP1Q14137 746 aaKnown RBP15.33■□□□□ 0.04
CCDC78-216ENST00000544996 SEMA3AQ14563 771 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 BRD3Q15059 726 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 CACHD1Q5VU97 1274 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 CES3Q6UWW8 571 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 CEACAM20Q6UY09 585 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 PRSS42Q7Z5A4 293 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 LDB1Q86U70 411 aaPredicted RBP15.33■□□□□ 0.04
CCDC78-216ENST00000544996 PDZD3Q86UT5 571 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 CAND1Q86VP6 1230 aaKnown RBP15.33■□□□□ 0.04
CCDC78-216ENST00000544996 PPIL6Q8IXY8 311 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 BMPERQ8N8U9 685 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 ACVR1CQ8NER5 493 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 LCN9Q8WX39 176 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 UBXN4Q92575 508 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 RUNDC3BQ96NL0 473 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 FCRL3Q96P31 734 aaPredicted RBP15.33■□□□□ 0.04
CCDC78-216ENST00000544996 ZPBPQ9BS86 351 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 CARD6Q9BX69 1037 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 DDX47Q9H0S4 455 aaKnown RBP15.33■□□□□ 0.04
CCDC78-216ENST00000544996 ZNF768Q9H5H4 540 aaKnown RBP15.33■□□□□ 0.04
CCDC78-216ENST00000544996 MARCH4Q9P2E8 410 aaPredicted RBP15.33■□□□□ 0.04
CCDC78-216ENST00000544996 ASIC3Q9UHC3 531 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 PCYOX1Q9UHG3 505 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 PKD1L2Q7Z442 2459 aa15.33■□□□□ 0.04
CCDC78-216ENST00000544996 FAM237BA0A1B0GVD1 139 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 OR6C74A6NCV1 312 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 POLR1CO15160 346 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-216ENST00000544996 SEPHS1P49903 392 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 CXADRP78310 365 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 PRKAA1Q13131 559 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 DNTTIP2Q5QJE6 756 aaKnown RBP15.32■□□□□ 0.04
CCDC78-216ENST00000544996 RNF187Q5TA31 235 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-216ENST00000544996 ANKS6Q68DC2 871 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 PTRHD1Q6GMV3 140 aaKnown RBP15.32■□□□□ 0.04
CCDC78-216ENST00000544996 PCGF5Q86SE9 256 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 LRRC6Q86X45 466 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 ZFAND4Q86XD8 727 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 CREG2Q8IUH2 290 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 NAT8LQ8N9F0 302 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 OR4E2Q8NGC2 313 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 ASZ1Q8WWH4 475 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 SLCO2A1Q92959 643 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 SERPINB12Q96P63 405 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 CCNL2Q96S94 520 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-216ENST00000544996 CD180Q99467 661 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 SRMSQ9H3Y6 488 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 RNF14Q9UBS8 474 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 GNPTGQ9UJJ9 305 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 B3GALT1Q9Y5Z6 326 aa15.32■□□□□ 0.04
CCDC78-216ENST00000544996 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.32■□□□□ 0.04
CCDC78-216ENST00000544996 UBA6A0AVT1 1052 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-216ENST00000544996 SLC5A10A0PJK1 596 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-216ENST00000544996 KIF1CO43896 1103 aaKnown RBP15.31■□□□□ 0.04
CCDC78-216ENST00000544996 APOA4P06727 396 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 ITGB6P18564 788 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 ARNTP27540 789 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 ARL4DP49703 201 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 ATP1A2P50993 1020 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 FOXM1Q08050 763 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 HSPA14Q0VDF9 509 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 PTK6Q13882 451 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 DHX34Q14147 1143 aaKnown RBP15.31■□□□□ 0.04
CCDC78-216ENST00000544996 TMED2Q15363 201 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 KIAA0930Q6ICG6 404 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-216ENST00000544996 CYB5D1Q6P9G0 228 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 SYDE1Q6ZW31 735 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-216ENST00000544996 KLHL7Q8IXQ5 586 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms