RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PHF19Q5T6S3 580 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 IGF2-ASQ6U949 168 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 ABRAXAS1Q6UWZ7 409 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 WASH2PQ6VEQ5 465 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 USP53Q70EK8 1073 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 RAB11FIP2Q7L804 512 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 NLRP9Q7RTR0 991 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 AMZ2Q86W34 360 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF547Q8IVP9 402 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 TRIM48Q8IWZ4 208 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 SLC35F6Q8N357 371 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 RASGEF1CQ8N431 466 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 FBXO39Q8N4B4 442 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 SVOPQ8N4V2 548 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 BEND7Q8N7W2 519 aaPredicted RBP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 RASGEF1AQ8N9B8 481 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 OR52K1Q8NGK4 314 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 OR10G6Q8NH81 332 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 CDKN2AIPNLQ96HQ2 116 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 PDLIM2Q96JY6 352 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 DNAJC1Q96KC8 554 aaKnown RBP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 TTC1Q99614 292 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 COPS8Q99627 209 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 CMKLR1Q99788 373 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 FOXP3Q9BZS1 431 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 EPB41L1Q9H4G0 881 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 EPB41L5Q9HCM4 733 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 WASH6PQ9NQA3 447 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 PRDM8Q9NQV8 689 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 THSD1Q9NS62 852 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 TRMT1Q9NXH9 659 aaKnown RBP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 CPNE7Q9UBL6 633 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 SLC23A2Q9UGH3 650 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 PCDHGA8Q9Y5G5 932 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 URB1O60287 2271 aaKnown RBP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 IGHV1OR21-1A0A087WYE8 117 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 GOLGA6L10A0A0M3HER8 536 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 A6NCN8 305 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 MGAT4DA6NG13 374 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 PGRMC1O00264 195 aaKnown RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 PLD2O14939 933 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 CASC3O15234 703 aaKnown RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 GPR39O43194 453 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 DUX1O43812 170 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 EML2O95834 649 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 GSTP1P09211 210 aaKnown RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 JMJD7P0C870 316 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 ZSCAN5DPP0CG00 497 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 ATP1B2P14415 290 aaPredicted RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 ADRA1DP25100 572 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 RPL10P27635 214 aaKnown RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 CD1CP29017 333 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 PPARGP37231 505 aaPredicted RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 KCNJ1P48048 391 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 PDX1P52945 283 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 CTSCP53634 463 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 RAC1P63000 192 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 SARNPP82979 210 aaKnown RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 CDK16Q00536 496 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 CACNG1Q06432 222 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 ZFP36L1Q07352 338 aaKnown RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 DMPKQ09013 629 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 TRA2AQ13595 282 aaKnown RBP eCLIP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 SEPT7Q16181 437 aaKnown RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 FNBP1LQ5T0N5 605 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 AGAP9Q5VTM2 703 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 TMEM71Q6P5X7 295 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF449Q6P9G9 518 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 TREML4Q6UXN2 200 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 DET1Q7L5Y6 550 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 TAS2R42Q7RTR8 314 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 C11orf96Q7Z7L8 435 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 B3GNT8Q7Z7M8 397 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 PRUNE1Q86TP1 453 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 TRIM42Q8IWZ5 723 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 RBM12BQ8IXT5 1001 aaKnown RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 NXPE1Q8N323 547 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 DTWD1Q8N5C7 304 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 PRELID2Q8N945 189 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 OR4D9Q8NGE8 314 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 UBXN4Q92575 508 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 PEX13Q92968 403 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 MAGOHBQ96A72 148 aaKnown RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 CXorf40BQ96DE9 158 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 SGF29Q96ES7 293 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 RHOVQ96L33 236 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 SLC46A1Q96NT5 459 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 RANBP9Q96S59 729 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 OSBPL9Q96SU4 736 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 KCNF1Q9H3M0 494 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 FAM96AQ9H5X1 160 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 VPS37BQ9H9H4 285 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 UCK1Q9HA47 277 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 RDH14Q9HBH5 336 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 EIF2B3Q9NR50 452 aaKnown RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 POT1Q9NUX5 634 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 PIH1D1Q9NWS0 290 aaKnown RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 BFARQ9NZS9 450 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 ACSL5Q9ULC5 683 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms