RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 TBC1D29Q9UFV1 150 aa12.82□□□□□ -0.36
DDX11-227ENST00000544652 DNAJC16Q9Y2G8 782 aa12.82□□□□□ -0.36
DDX11-227ENST00000544652 COL27A1Q8IZC6 1860 aaPredicted RBP12.82□□□□□ -0.36
DDX11-227ENST00000544652 IQANK1A0A1B0GTG1 560 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 RASGRF2O14827 1237 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 KRT37O76014 449 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 EML2O95834 649 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 ALDOAP04075 364 aaKnown RBP12.81□□□□□ -0.36
DDX11-227ENST00000544652 ANXA6P08133 673 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 SNRPAP09012 282 aaKnown RBP12.81□□□□□ -0.36
DDX11-227ENST00000544652 CBSLP0DN79 551 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 F3P13726 295 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 BRAFP15056 766 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 STMN1P16949 149 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 ZNF37AP17032 561 aaPredicted RBP12.81□□□□□ -0.36
DDX11-227ENST00000544652 PDHA2P29803 388 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 CBSP35520 551 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 RAB10P61026 200 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 ZNF844Q08AG5 666 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 BMPR2Q13873 1038 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 BOP1Q14137 746 aaKnown RBP12.81□□□□□ -0.36
DDX11-227ENST00000544652 USP10Q14694 798 aaKnown RBP12.81□□□□□ -0.36
DDX11-227ENST00000544652 TMED2Q15363 201 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 UAP1L1Q3KQV9 507 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 TTLL9Q3SXZ7 439 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 MROH9Q5TGP6 573 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 CAPRIN2Q6IMN6 1127 aaKnown RBP12.81□□□□□ -0.36
DDX11-227ENST00000544652 SLC30A9Q6PML9 568 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 PAQR3Q6TCH7 311 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 TMEM207Q6UWW9 146 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 LRIG3Q6UXM1 1119 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 NAPRTQ6XQN6 538 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 TIFABQ6ZNK6 161 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 NEK10Q6ZWH5 1172 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 PIM3Q86V86 326 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 C17orf82Q86X59 251 aaPredicted RBP12.81□□□□□ -0.36
DDX11-227ENST00000544652 GATAD2AQ86YP4 633 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 VRK3Q8IV63 474 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 SIDT2Q8NBJ9 832 aaKnown RBP12.81□□□□□ -0.36
DDX11-227ENST00000544652 TMEM159Q96B96 161 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 FAM136AQ96C01 138 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 TSPAN17Q96FV3 270 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 OSGEPL1Q9H4B0 414 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 CAB39LQ9H9S4 337 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 TMEM9BQ9NQ34 198 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 NLGN3Q9NZ94 848 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 CTNNAL1Q9UBT7 734 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 LGALS13Q9UHV8 139 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 TRMT6Q9UJA5 497 aaKnown RBP12.81□□□□□ -0.36
DDX11-227ENST00000544652 SLC39A10Q9ULF5 831 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 WDR37Q9Y2I8 494 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 LAMA1P25391 3075 aa12.81□□□□□ -0.36
DDX11-227ENST00000544652 OR5K4A6NMS3 321 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 TSPAN12O95859 305 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 ENO3P13929 434 aaPredicted RBP12.8□□□□□ -0.36
DDX11-227ENST00000544652 ACADLP28330 430 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 PREPP48147 710 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 SERPINB8P50452 374 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 PGGT1BP53609 377 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 SLC12A2P55011 1212 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 IFFO1Q0D2I5 559 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 HSPA14Q0VDF9 509 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 CLCA4Q14CN2 919 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 TCEA2Q15560 299 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 SYTL3Q4VX76 610 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 ACSBG2Q5FVE4 666 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 LRRC8EQ6NSJ5 796 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 IYDQ6PHW0 289 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 CYHR1Q6ZMK1 362 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 CCDC91Q7Z6B0 441 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 PDZD3Q86UT5 571 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 RASGRP3Q8IV61 690 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 CPNE9Q8IYJ1 553 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 NAGSQ8N159 534 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 FAM46DQ8NEK8 389 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 OR4C6Q8NH72 309 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 ANKRD7Q92527 254 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 PDLIM5Q96HC4 596 aaKnown RBP12.8□□□□□ -0.36
DDX11-227ENST00000544652 UBXN10Q96LJ8 280 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 RMDN2Q96LZ7 410 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 DUSP23Q9BVJ7 150 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 WWP1Q9H0M0 922 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 SYTL2Q9HCH5 934 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 PRM3Q9NNZ6 103 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 SARS2Q9NP81 518 aaKnown RBP12.8□□□□□ -0.36
DDX11-227ENST00000544652 PRDM8Q9NQV8 689 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 SNX15Q9NRS6 342 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 DOLKQ9UPQ8 538 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 DNAH14Q0VDD8 3507 aa12.8□□□□□ -0.36
DDX11-227ENST00000544652 SNRNP200O75643 2136 aaKnown RBP12.79□□□□□ -0.36
DDX11-227ENST00000544652 KIR2DS5A0A0G2JLQ3 304 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 A0A0G2JNG1 304 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 TRIM49D1C9J1S8 452 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 KIR2DS3K7RE56 304 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 FLRT2O43155 660 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 NOBOXO60393 691 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 RFPL1O75677 317 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 MATN4O95460 622 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 SLC35E2BP0CK96 405 aa12.79□□□□□ -0.36
DDX11-227ENST00000544652 MPC1LP0DKB6 136 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms