RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 SERAC1Q96JX3 654 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 OR14A2Q96R54 314 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 WDR24Q96S15 920 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 SERINC2Q96SA4 455 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 EIF3CQ99613 913 aaKnown RBP6.17□□□□□ -1.42
CPSF7-222ENST00000544585 SEMA4CQ9C0C4 833 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 ABCG4Q9H172 646 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 PDCL3Q9H2J4 239 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 CCDC134Q9H6E4 229 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 SMYD3Q9H7B4 428 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 POLR1BQ9H9Y6 1135 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 EBF2Q9HAK2 575 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 CYP3A43Q9HB55 503 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 CPNE5Q9HCH3 593 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 ZFP64Q9NPA5 681 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 AGPAT3Q9NRZ7 376 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 THSD1Q9NS62 852 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 PLA2G3Q9NZ20 509 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 GGA2Q9UJY4 613 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 STOML2Q9UJZ1 356 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 GPR34Q9UPC5 381 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 HBS1LQ9Y450 684 aaKnown RBP6.17□□□□□ -1.42
CPSF7-222ENST00000544585 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.17□□□□□ -1.42
CPSF7-222ENST00000544585 CELSR3Q9NYQ7 3312 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 SMG1Q96Q15 3661 aaKnown RBP6.17□□□□□ -1.42
CPSF7-222ENST00000544585 ARID1BQ8NFD5 2236 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-222ENST00000544585 NEMP2A6NFY4 417 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 SAC3D1A6NKF1 404 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 C10orf142B7Z368 130 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 K7ENP7 123 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 SPTLC2O15270 562 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 USP12O75317 370 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 GPANK1O95872 356 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 GP1BAP07359 652 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 MED14OSP0DP75 135 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 HOXD9P28356 352 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-222ENST00000544585 SLC8A1P32418 973 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 HOXD13P35453 343 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 PSMC2P35998 433 aaKnown RBP6.16□□□□□ -1.42
CPSF7-222ENST00000544585 NNMTP40261 264 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 GSTM5P46439 218 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 KCNC1P48547 511 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 MAN2A2P49641 1150 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 CYP2J2P51589 502 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 CCR9P51686 369 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 DRG2P55039 364 aaKnown RBP6.16□□□□□ -1.42
CPSF7-222ENST00000544585 YWHAGP61981 247 aaKnown RBP eCLIP6.16□□□□□ -1.42
CPSF7-222ENST00000544585 PPP2CBP62714 309 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 PPP2CAP67775 309 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 HSD11B2P80365 405 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 MC2RQ01718 297 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 KCNJ12Q14500 433 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 CST6Q15828 149 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 BAK1Q16611 211 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 HNRNPA1L2Q32P51 320 aaKnown RBP6.16□□□□□ -1.42
CPSF7-222ENST00000544585 TBRG1Q3YBR2 411 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 DCAF17Q5H9S7 520 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-222ENST00000544585 COLEC12Q5KU26 742 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 NAA35Q5VZE5 725 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 ICE2Q659A1 982 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 NAPEPLDQ6IQ20 393 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 INO80CQ6PI98 192 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-222ENST00000544585 ATG14Q6ZNE5 492 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 TAX1BP1Q86VP1 789 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 UNC45BQ8IWX7 931 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 TTC39CQ8N584 583 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 ZNF366Q8N895 744 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 LINC01356Q8N9X3 169 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 OR56A1Q8NGH5 318 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 FIBINQ8TAL6 211 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 SUN3Q8TAQ9 357 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 GOLGA5Q8TBA6 731 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 AZIN2Q96A70 460 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 DACT3Q96B18 629 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-222ENST00000544585 DDX50Q9BQ39 737 aaKnown RBP6.16□□□□□ -1.42
CPSF7-222ENST00000544585 FGFBP2Q9BYJ0 223 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 SDCBP2Q9H190 292 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 TNMDQ9H2S6 317 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 CUEDC2Q9H467 287 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 USP29Q9HBJ7 922 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 FAM49BQ9NUQ9 324 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 ABCB8Q9NUT2 735 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 NSMCE4AQ9NXX6 385 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 SERTAD3Q9UJW9 196 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 SMC3Q9UQE7 1217 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-222ENST00000544585 ABCA12Q86UK0 2595 aa6.16□□□□□ -1.42
CPSF7-222ENST00000544585 COL5A1P20908 1838 aaPredicted RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 FAM90A20PA6NIJ5 464 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 AGPSO00116 658 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 MID1O15344 667 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 LATO43561 262 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 TRIAP1O43715 76 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 MOCS3O95396 460 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 VNN1O95497 513 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 ASS1P00966 412 aaKnown RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 SRPRAP08240 638 aaKnown RBP6.15□□□□□ -1.42
CPSF7-222ENST00000544585 ALPPL2P10696 532 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 RRM1P23921 792 aa6.15□□□□□ -1.42
CPSF7-222ENST00000544585 ABCD3P28288 659 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms