RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 SARS2Q9NP81 518 aaKnown RBP9.35□□□□□ -0.91
YBX3-215ENST00000544504 CD93Q9NPY3 652 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 ATXN10Q9UBB4 475 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 PILRBQ9UKJ0 227 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 TMCO1Q9UM00 188 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 SLC17A4Q9Y2C5 497 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 PLLPQ9Y342 182 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 PLXNB3Q9ULL4 1909 aa9.35□□□□□ -0.91
YBX3-215ENST00000544504 A0A087WV48 116 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 PABPN1LA6NDY0 278 aaKnown RBP9.34□□□□□ -0.91
YBX3-215ENST00000544504 MGAT4DA6NG13 374 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 DNAJC6O75061 913 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 SPAG7O75391 227 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 FTH1P19P0C7X4 201 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 CCDC166P0CW27 439 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 CD59P13987 128 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 ZNF8P17098 575 aaPredicted RBP9.34□□□□□ -0.91
YBX3-215ENST00000544504 TAC1P20366 129 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 AOAHP28039 575 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 CA5AP35218 305 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 BLKP51451 505 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 RACK1P63244 317 aaKnown RBP9.34□□□□□ -0.91
YBX3-215ENST00000544504 IL9RQ01113 521 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 SLC14A1Q13336 389 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 CSHL1Q14406 222 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 ACAP2Q15057 778 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 DUOXA1Q1HG43 343 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 KHDC1Q4VXA5 237 aaKnown RBP9.34□□□□□ -0.91
YBX3-215ENST00000544504 HHATQ5VTY9 493 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 LYSMD4Q5XG99 296 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 PAQR3Q6TCH7 311 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 GCNT7Q6ZNI0 430 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 ARMCX6Q7L4S7 300 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 DET1Q7L5Y6 550 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 AMZ2Q86W34 360 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 GALNT13Q8IUC8 556 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 TRIM42Q8IWZ5 723 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 MYO1HQ8N1T3 1032 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 PELI3Q8N2H9 469 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 OXR1Q8N573 874 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 MINDY1Q8N5J2 469 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 BEND7Q8N7W2 519 aaPredicted RBP9.34□□□□□ -0.91
YBX3-215ENST00000544504 ACVR1CQ8NER5 493 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 OR56A4Q8NGH8 313 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 ELMO1Q92556 727 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 GLMNQ92990 594 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 ZBTB9Q96C00 473 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 CCDC126Q96EE4 140 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 KLHDC7BQ96G42 594 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 SCARF2Q96GP6 870 aaPredicted RBP9.34□□□□□ -0.91
YBX3-215ENST00000544504 SCYL1Q96KG9 808 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 BMFQ96LC9 184 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 FOPNLQ96NB1 174 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 MRPL57Q9BQC6 102 aaKnown RBP9.34□□□□□ -0.91
YBX3-215ENST00000544504 TIMM29Q9BSF4 260 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 MRPL46Q9H2W6 279 aaKnown RBP9.34□□□□□ -0.91
YBX3-215ENST00000544504 FZD3Q9NPG1 666 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 AASDHPPTQ9NRN7 309 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 INTS9Q9NV88 658 aaKnown RBP9.34□□□□□ -0.91
YBX3-215ENST00000544504 SUSD2Q9UGT4 822 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 RUVBL2Q9Y230 463 aaKnown RBP9.34□□□□□ -0.91
YBX3-215ENST00000544504 OR1A2Q9Y585 309 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 PRSS21Q9Y6M0 314 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 NAV2Q8IVL1 2488 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 NUMA1Q14980 2115 aa9.34□□□□□ -0.91
YBX3-215ENST00000544504 CACNA1EQ15878 2313 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 POM121BA6NF01 834 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 OR2AG2A6NM03 316 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 SYCE1LA8MT33 242 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 BIRC5O15392 142 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 GRID2O43424 1007 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 SGTAO43765 313 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 MTX2O75431 263 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 C1QL1O75973 258 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 SLCO2B1O94956 709 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 WISP3O95389 354 aaPredicted RBP9.33□□□□□ -0.92
YBX3-215ENST00000544504 PRB1P04280 392 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 F7P08709 466 aaPredicted RBP9.33□□□□□ -0.92
YBX3-215ENST00000544504 MPC1LP0DKB6 136 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 PLA2G2AP14555 144 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 GNSP15586 552 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 ITPKAP23677 461 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 CD38P28907 300 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 CCR7P32248 378 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 CTSCP53634 463 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 PRKAA2P54646 552 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 TIAL1Q01085 375 aaKnown RBP eCLIP9.33□□□□□ -0.92
YBX3-215ENST00000544504 LRP8Q14114 963 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 BOP1Q14137 746 aaKnown RBP9.33□□□□□ -0.92
YBX3-215ENST00000544504 TEAD4Q15561 434 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 DOK6Q6PKX4 331 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 Q6ZSR6 202 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 ZNF605Q86T29 641 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 ADAMTSL2Q86TH1 951 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 TRIM74Q86UV6 250 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 PIM3Q86V86 326 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 CENPLQ8N0S6 344 aaPredicted RBP9.33□□□□□ -0.92
YBX3-215ENST00000544504 PNPLA1Q8N8W4 532 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 ANKRD42Q8N9B4 389 aa9.33□□□□□ -0.92
YBX3-215ENST00000544504 CCDC63Q8NA47 563 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms