RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 VRK3Q8IV63 474 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 TRIM48Q8IWZ4 208 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 ZBTB2Q8N680 514 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 SIDT2Q8NBJ9 832 aaKnown RBP13.33□□□□□ -0.28
SP140-213ENST00000543928 MRRFQ96E11 262 aaKnown RBP13.33□□□□□ -0.28
SP140-213ENST00000543928 VPS39Q96JC1 886 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 INSM2Q96T92 566 aaPredicted RBP13.33□□□□□ -0.28
SP140-213ENST00000543928 GPR21Q99679 349 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 RBBP8Q99708 897 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 MCMBPQ9BTE3 642 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 LATS2Q9NRM7 1088 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 DLL3Q9NYJ7 618 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 CPNE7Q9UBL6 633 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 CDYLQ9Y232 598 aa13.33□□□□□ -0.28
SP140-213ENST00000543928 CFAP20Q9Y6A4 193 aaKnown RBP13.33□□□□□ -0.28
SP140-213ENST00000543928 SPAARA0A1B0GVQ0 90 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 FAM95CA0A1B0GW59 222 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 EME2A4GXA9 379 aaPredicted RBP13.32□□□□□ -0.28
SP140-213ENST00000543928 IFRD1O00458 451 aaPredicted RBP13.32□□□□□ -0.28
SP140-213ENST00000543928 GIPC1O14908 333 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 FAM155BO75949 473 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 KCNK5O95279 499 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 PYGBP11216 843 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 GLB1P16278 677 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 XRCC1P18887 633 aaPredicted RBP13.32□□□□□ -0.28
SP140-213ENST00000543928 ACP1P24666 158 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 SLC19A1P41440 591 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 FASLGP48023 281 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 ACADVLP49748 655 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 CDKN2DP55273 166 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 UBE2IP63279 158 aaKnown RBP13.32□□□□□ -0.28
SP140-213ENST00000543928 TIAL1Q01085 375 aaKnown RBP eCLIP13.32□□□□□ -0.28
SP140-213ENST00000543928 HHEXQ03014 270 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 PLEKHS1Q5SXH7 462 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 GRTP1Q5TC63 336 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 FAM45BPQ6NSW5 357 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 GLRX5Q86SX6 157 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 PDZD3Q86UT5 571 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 PIM3Q86V86 326 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 SPNS2Q8IVW8 549 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 SLC22A15Q8IZD6 547 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 ACVR1CQ8NER5 493 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 OR6C4Q8NGE1 309 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 GIMAP7Q8NHV1 300 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 IFI44Q8TCB0 444 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 FAM45AQ8TCE6 357 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 AENQ8WTP8 325 aaKnown RBP13.32□□□□□ -0.28
SP140-213ENST00000543928 NAT6Q93015 286 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 CXorf40BQ96DE9 158 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 ELMO2Q96JJ3 720 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 C12orf66Q96MD2 445 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 SLC30A3Q99726 388 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 EPB41L4BQ9H329 900 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 IMP3Q9NV31 184 aaKnown RBP13.32□□□□□ -0.28
SP140-213ENST00000543928 TAS2R13Q9NYV9 303 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 LRIT1Q9P2V4 623 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 TRMT6Q9UJA5 497 aaKnown RBP13.32□□□□□ -0.28
SP140-213ENST00000543928 RAB21Q9UL25 225 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 VWA7Q9Y334 891 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 DHRS7Q9Y394 339 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 RNF215Q9Y6U7 377 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 ASXL3Q9C0F0 2248 aa13.32□□□□□ -0.28
SP140-213ENST00000543928 PRAMEF33A0A0G2JMD5 474 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 RHPN2P1A8MT19 583 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 PPM1DO15297 605 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 NUDT21O43809 227 aaKnown RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 SLCO2B1O94956 709 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 VIPP01282 170 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 TUBBP07437 444 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 MTHFD1P11586 935 aaKnown RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 SAT1P21673 171 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 FDXRP22570 491 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 SPRP35270 261 aaPredicted RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 SIM1P81133 766 aaPredicted RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 ILF2Q12905 390 aaKnown RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 SLC29A2Q14542 456 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 GBX1Q14549 363 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 UAP1Q16222 522 aaPredicted RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 KLHL38Q2WGJ6 581 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 TTLL9Q3SXZ7 439 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 CCDC157Q569K6 752 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 ACSBG2Q5FVE4 666 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 PERM1Q5SV97 790 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 UGT3A1Q6NUS8 523 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 DUS1LQ6P1R4 473 aaKnown RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 EMBQ6PCB8 327 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 AVL9Q8NBF6 648 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 CD200R1Q8TD46 325 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 SKA2Q8WVK7 121 aaPredicted RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 UBLCP1Q8WVY7 318 aaPredicted RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 INPP5DQ92835 1189 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 CCDC74AQ96AQ1 378 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 OLFM1Q99784 485 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 STN1Q9H668 368 aaKnown RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 KLHL42Q9P2K6 505 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 TSR3Q9UJK0 312 aaKnown RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 MTO1Q9Y2Z2 717 aaKnown RBP13.31□□□□□ -0.28
SP140-213ENST00000543928 RP1P56715 2156 aa13.31□□□□□ -0.28
SP140-213ENST00000543928 EXOC1LA0A1B0GW35 172 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms