RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 SH3BP2P78314 561 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 BTKQ06187 659 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 CDC16Q13042 620 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 BOP1Q14137 746 aaKnown RBP9.15□□□□□ -0.94
GNE-206ENST00000543356 ZNF648Q5T619 568 aaPredicted RBP9.15□□□□□ -0.94
GNE-206ENST00000543356 SULT1C3Q6IMI6 304 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.15□□□□□ -0.94
GNE-206ENST00000543356 ADGRG6Q86SQ4 1221 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 CLYBLQ8N0X4 340 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 SDR16C5Q8N3Y7 309 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 TRPC4APQ8TEL6 797 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 ASZ1Q8WWH4 475 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 ERLEC1Q96DZ1 483 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 NSL1Q96IY1 281 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 NSUN5Q96P11 429 aaKnown RBP9.15□□□□□ -0.94
GNE-206ENST00000543356 OR52B2Q96RD2 323 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 CCM2Q9BSQ5 444 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 MID1IP1Q9NPA3 183 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 ARMCX1Q9P291 453 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 SERGEFQ9UGK8 458 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 EIF2B4Q9UI10 523 aaKnown RBP9.15□□□□□ -0.94
GNE-206ENST00000543356 PTBP2Q9UKA9 531 aaKnown RBP9.15□□□□□ -0.94
GNE-206ENST00000543356 PIKFYVEQ9Y2I7 2098 aa9.15□□□□□ -0.94
GNE-206ENST00000543356 OR2AG2A6NM03 316 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 SDHDO14521 159 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 AZIN1O14977 448 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 PLRG1O43660 514 aaKnown RBP9.15□□□□□ -0.95
GNE-206ENST00000543356 VEGFDO43915 354 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 TSPAN8P19075 237 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 COL9A1P20849 921 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 MAPK9P45984 424 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 CDH13P55290 713 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 HSPA14Q0VDF9 509 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 UBAP2LQ14157 1087 aaKnown RBP9.15□□□□□ -0.95
GNE-206ENST00000543356 PHKG1Q16816 387 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 ZNF658BQ4V348 819 aaPredicted RBP9.15□□□□□ -0.95
GNE-206ENST00000543356 TTC23LQ6PF05 361 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 TCAIMQ8N3R3 496 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 OR56A4Q8NGH8 313 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 ACTRT2Q8TDY3 377 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 ASB11Q8WXH4 323 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 DLG3Q92796 817 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 COX14Q96I36 57 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 ZNF514Q96K75 400 aaPredicted RBP9.15□□□□□ -0.95
GNE-206ENST00000543356 FAM161BQ96MY7 647 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 ZNF382Q96SR6 550 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 SLC12A9Q9BXP2 914 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 NUSAP1Q9BXS6 441 aaKnown RBP9.15□□□□□ -0.95
GNE-206ENST00000543356 WDR55Q9H6Y2 383 aaPredicted RBP9.15□□□□□ -0.95
GNE-206ENST00000543356 EBF2Q9HAK2 575 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 TRIM39Q9HCM9 518 aa9.15□□□□□ -0.95
GNE-206ENST00000543356 UTP6Q9NYH9 597 aaKnown RBP9.15□□□□□ -0.95
GNE-206ENST00000543356 SLC5A10A0PJK1 596 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 IGLON5A6NGN9 336 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 GFYI3L273 518 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 SLC22A2O15244 555 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 TAPBPO15533 448 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 LILRB5O75023 590 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 RNASEH2AO75792 299 aaKnown RBP9.14□□□□□ -0.95
GNE-206ENST00000543356 DNTTP04053 509 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 EPHA3P29320 983 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 PKNOX1P55347 436 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 GTF2H3Q13889 308 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 SMAD2Q15796 467 aaKnown RBP9.14□□□□□ -0.95
GNE-206ENST00000543356 LSM12Q3MHD2 195 aaKnown RBP9.14□□□□□ -0.95
GNE-206ENST00000543356 UGT3A2Q3SY77 523 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 FBXO43Q4G163 708 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 SYTL3Q4VX76 610 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 KIAA1161Q6NSJ0 714 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 TMEM220Q6QAJ8 160 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 EFL1Q7Z2Z2 1120 aaKnown RBP9.14□□□□□ -0.95
GNE-206ENST00000543356 CACUL1Q86Y37 369 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 TREML1Q86YW5 311 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 VRK3Q8IV63 474 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 BEND7Q8N7W2 519 aaPredicted RBP9.14□□□□□ -0.95
GNE-206ENST00000543356 RHBDF1Q96CC6 855 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 KLHL29Q96CT2 875 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 HIC2Q96JB3 615 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 LINC00615Q96LM1 132 aaPredicted RBP9.14□□□□□ -0.95
GNE-206ENST00000543356 TMEM79Q9BSE2 394 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 HGH1Q9BTY7 390 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 MKRN2Q9H000 416 aaKnown RBP9.14□□□□□ -0.95
GNE-206ENST00000543356 ZNF385DQ9H6B1 395 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 PARVBQ9HBI1 364 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 ZBTB26Q9HCK0 441 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 SEMA4BQ9NPR2 832 aaPredicted RBP9.14□□□□□ -0.95
GNE-206ENST00000543356 ARHGEF3Q9NR81 526 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 SLC2A4RGQ9NR83 387 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 FZD4Q9ULV1 537 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 ASB1Q9Y576 335 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 MYO9BQ13459 2157 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 C5orf42Q9H799 3197 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 GOLGA8QA0A0J9YX86 632 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 GOLGA8OA6NCC3 632 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 PRR5-ARHGAP8B1AHC4 643 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 E9PBE3 544 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 GOLGA8NF8WBI6 632 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 KLHL41O60662 606 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 PCDH8O95206 1070 aa9.14□□□□□ -0.95
GNE-206ENST00000543356 ESRRBO95718 433 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms