RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 RAB39AQ14964 217 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 MAPKAPK3Q16644 382 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 MS4A13Q5J8X5 152 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 MBLAC2Q68D91 279 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 ATG14Q6ZNE5 492 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 PID1Q7Z2X4 250 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 RNF135Q8IUD6 432 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 ADGRG5Q8IZF4 528 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 UNC5BQ8IZJ1 945 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 RTL3Q8N8U3 475 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF680Q8NEM1 530 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 TANKQ92844 425 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 FBXO32Q969P5 355 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 SGF29Q96ES7 293 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 IGSF21Q96ID5 467 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 VAT1Q99536 393 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 SEPT5Q99719 369 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 PCDHAC1Q9H158 963 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 NCOR1P1Q9H4R4 102 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 WDR55Q9H6Y2 383 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 SYBUQ9NX95 663 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 KLHL8Q9P2G9 620 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 CYB5R1Q9UHQ9 305 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 TRHDEQ9UKU6 1024 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 BACE2Q9Y5Z0 518 aa7.89□□□□□ -1.15
PDLIM5-221ENST00000542407 PTPRSQ13332 1948 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 PRSS51A0A1B0GVH4 220 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 AXIN1O15169 862 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 TSC22D2O75157 780 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 HSPA4LO95757 839 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 PEX11BO96011 259 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 INHBBP09529 407 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 FGF3P11487 239 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 HSD3B2P26439 372 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 PIK3R1P27986 724 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 GABRB3P28472 473 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 HOXA6P31267 233 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 CRHR1P34998 444 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 NUDT1P36639 197 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 YAP1P46937 504 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 FCHO2Q0JRZ9 810 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 TRIP4Q15650 581 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 USP51Q70EK9 711 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 CLIP4Q8N3C7 705 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 TCAIMQ8N3R3 496 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 PIK3C3Q8NEB9 887 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 OR6S1Q8NH40 331 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 LHFPL5Q8TAF8 219 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 HM13Q8TCT9 377 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 CYGBQ8WWM9 190 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 MARC2Q969Z3 335 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 VPS33AQ96AX1 596 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 ZNF597Q96LX8 424 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 OR52B2Q96RD2 323 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 IL12RB2Q99665 862 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 NPLQ9BXD5 320 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 TGIF2Q9GZN2 237 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 SYNDIG1Q9H7V2 258 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 WDR41Q9HAD4 459 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 WBP1LQ9NX94 342 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 MPP6Q9NZW5 540 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 SH3BGRL2Q9UJC5 107 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 PRPF19Q9UMS4 504 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 VWA7Q9Y334 891 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 DGKBQ9Y6T7 804 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 KIAA1671Q9BY89 1806 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 A0A0G2JPF8 293 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 SLC38A8A6NNN8 435 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 HNRNPCL3B7ZW38 293 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 HTRA2O43464 458 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 MOCS2O96007 188 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 HNRNPCL4P0DMR1 293 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 PGAM1P18669 254 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 EEF1B2P24534 225 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 NR4A2P43354 598 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 ABCG1P45844 678 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 MAPK8P45983 427 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 CREB5Q02930 508 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 KCNC4Q03721 635 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 EFEMP1Q12805 493 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 PPA1Q15181 289 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 MAPK11Q15759 364 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 PIGGQ5H8A4 983 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 CLEC2AQ6UVW9 174 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 TAS2R42Q7RTR8 314 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 DCP2Q8IU60 420 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 TMEM126BQ8IUX1 230 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 CPA6Q8N4T0 437 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 GANCQ8TET4 914 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 TRUB1Q8WWH5 349 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 TOP1MTQ969P6 601 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 MOCOSQ96EN8 888 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 MYEOVQ96EZ4 313 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 CLSTN3Q9BQT9 956 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 MVB12BQ9H7P6 319 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 CATSPERBQ9H7T0 1116 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 BRD7Q9NPI1 651 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 TLR8Q9NR97 1041 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 DNAJC28Q9NX36 388 aa7.88□□□□□ -1.15
PDLIM5-221ENST00000542407 SLC17A6Q9P2U8 582 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms