RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ASB5Q8WWX0 329 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 NXNL1Q96CM4 212 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 CDHR1Q96JP9 859 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 SEPHS2Q99611 448 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 SH3GL2Q99962 352 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 KXD1Q9BQD3 176 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 NOL11Q9H8H0 719 aaKnown RBP4.16□□□□□ -1.74
SNHG1-217ENST00000541578 DDX4Q9NQI0 724 aaKnown RBP4.16□□□□□ -1.74
SNHG1-217ENST00000541578 CWC25Q9NXE8 425 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-217ENST00000541578 CRNNQ9UBG3 495 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-217ENST00000541578 STON1Q9Y6Q2 735 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 EIF3AQ14152 1382 aaKnown RBP4.15□□□□□ -1.74
SNHG1-217ENST00000541578 ABCC11Q96J66 1382 aa4.15□□□□□ -1.74
SNHG1-217ENST00000541578 ANKRD30BQ9BXX2 1392 aa4.15□□□□□ -1.74
SNHG1-217ENST00000541578 NUP188Q5SRE5 1749 aa4.15□□□□□ -1.74
SNHG1-217ENST00000541578 RGPD3A6NKT7 1758 aaPredicted RBP4.15□□□□□ -1.74
SNHG1-217ENST00000541578 RGPD4Q7Z3J3 1758 aa4.15□□□□□ -1.74
SNHG1-217ENST00000541578 NAIPQ13075 1403 aa4.15□□□□□ -1.74
SNHG1-217ENST00000541578 VPS8Q8N3P4 1428 aa4.15□□□□□ -1.74
SNHG1-217ENST00000541578 A0A0B4J293 547 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 HTR3EA5X5Y0 456 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 OR6C76A6NM76 312 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 ANXA2P2A6NMY6 339 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 H0YGN5 161 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 ZNF263O14978 683 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 ZBTB43O43298 467 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 ITM2AO43736 263 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 T-ENOLP0DO92 83 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 PRLRP16471 622 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 HLA-DPA1P20036 260 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 ACHEP22303 614 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 MMP14P50281 582 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 PRELPP51888 382 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 SNRPEP62304 92 aaKnown RBP4.15□□□□□ -1.75
SNHG1-217ENST00000541578 CSNK2A1P68400 391 aaPredicted RBP4.15□□□□□ -1.75
SNHG1-217ENST00000541578 COASYQ13057 564 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 RCN2Q14257 317 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 SMC1AQ14683 1233 aaKnown RBP4.15□□□□□ -1.75
SNHG1-217ENST00000541578 MORF4L2Q15014 288 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 KLHL22Q53GT1 634 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 DCST1Q5T197 706 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 ASPHD1Q5U4P2 390 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 PLA2G4FQ68DD2 849 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 HIST2H2BCQ6DN03 193 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 HIST2H2BDQ6DRA6 164 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 PLEKHA7Q6IQ23 1121 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 SUSD1Q6UWL2 747 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 ZBTB49Q6ZSB9 765 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 MON1BQ7L1V2 547 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 MEPCEQ7L2J0 689 aaKnown RBP4.15□□□□□ -1.75
SNHG1-217ENST00000541578 SHFQ7M4L6 423 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 PIWIL3Q7Z3Z3 882 aaKnown RBP4.15□□□□□ -1.75
SNHG1-217ENST00000541578 HOOK3Q86VS8 718 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 TUSC5Q8IXB3 177 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 NDUFAF2Q8N183 169 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 CSNK2A3Q8NEV1 391 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 OR10S1Q8NGN2 331 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 PSMA8Q8TAA3 256 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 BICD2Q8TD16 824 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 PPP4R1Q8TF05 950 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 DNAAF4Q8WXU2 420 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 EGLN2Q96KS0 407 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 RMDN2Q96LZ7 410 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 MS4A10Q96PG2 267 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 SEMA3CQ99985 751 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 MMTAG2Q9BU76 263 aaKnown RBP4.15□□□□□ -1.75
SNHG1-217ENST00000541578 RBM38Q9H0Z9 239 aaKnown RBP4.15□□□□□ -1.75
SNHG1-217ENST00000541578 ST6GALNAC4Q9H4F1 302 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 MAGIXQ9H6Y5 334 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 ANKZF1Q9H8Y5 726 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 OLAHQ9NV23 265 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 TMEM51Q9NW97 253 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 SLC9A2Q9UBY0 812 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 MOSPD1Q9UJG1 213 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 KNSTRNQ9Y448 316 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 SBF2Q86WG5 1849 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 CAMTA1Q9Y6Y1 1673 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 DLC1Q96QB1 1528 aa4.15□□□□□ -1.75
SNHG1-217ENST00000541578 ROCK1Q13464 1354 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 DHX57Q6P158 1386 aaKnown RBP4.14□□□□□ -1.75
SNHG1-217ENST00000541578 MAP3K5Q99683 1374 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 A0A1W2PR77 199 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 GAGE12JA6NER3 117 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 DDX39AO00148 427 aaKnown RBP4.14□□□□□ -1.75
SNHG1-217ENST00000541578 MDM4O15151 490 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 GOSR1O95249 250 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 KCNK5O95279 499 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 C22orf31O95567 290 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 CYC1P08574 325 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 VIMP08670 466 aaKnown RBP4.14□□□□□ -1.75
SNHG1-217ENST00000541578 LINGO3P0C6S8 592 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 G6PDP11413 515 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 CHRNB2P17787 502 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 CASTP20810 708 aaKnown RBP4.14□□□□□ -1.75
SNHG1-217ENST00000541578 SOAT1P35610 550 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 PIGAP37287 484 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 RBPJQ06330 500 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 AP1B1Q10567 949 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 ST3GAL1Q11201 340 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 PKP1Q13835 747 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms