RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CBSLP0DN79 551 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 ENO3P13929 434 aaPredicted RBP18.35■□□□□ 0.53
VPS33A-205ENST00000541169 TNFRSF8P28908 595 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 SSTR1P30872 391 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 CBSP35520 551 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 SLC19A1P41440 591 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 FOXK2Q01167 660 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 HSPA14Q0VDF9 509 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 SPIDRQ14159 915 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 CTSL3PQ5NE16 218 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 TEX35Q5T0J7 233 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 N4BP2L1Q5TBK1 243 aaPredicted RBP18.35■□□□□ 0.53
VPS33A-205ENST00000541169 TRMT10BQ6PF06 316 aaKnown RBP18.35■□□□□ 0.53
VPS33A-205ENST00000541169 TMEM26Q6ZUK4 368 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 UNC5BQ8IZJ1 945 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 PATE1Q8WXA2 126 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 AHCYL2Q96HN2 611 aaKnown RBP18.35■□□□□ 0.53
VPS33A-205ENST00000541169 C9orf72Q96LT7 481 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 LRRN3Q9H3W5 708 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 KCNK4Q9NYG8 393 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 PSMD13Q9UNM6 376 aa18.35■□□□□ 0.53
VPS33A-205ENST00000541169 OR52A4PA6NMU1 304 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 NTN3O00634 580 aaPredicted RBP18.34■□□□□ 0.53
VPS33A-205ENST00000541169 TUBBP07437 444 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 ADRB1P08588 477 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 ALDH4A1P30038 563 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 CSE1LP55060 971 aaKnown RBP18.34■□□□□ 0.53
VPS33A-205ENST00000541169 PERM1Q5SV97 790 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 TTC23LQ6PF05 361 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 UNC5DQ6UXZ4 953 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 RBM44Q6ZP01 1051 aaKnown RBP18.34■□□□□ 0.53
VPS33A-205ENST00000541169 NEK10Q6ZWH5 1172 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 TRMT10CQ7L0Y3 403 aaKnown RBP18.34■□□□□ 0.53
VPS33A-205ENST00000541169 TBC1D21Q8IYX1 336 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 TFGQ92734 400 aaPredicted RBP18.34■□□□□ 0.53
VPS33A-205ENST00000541169 FOPNLQ96NB1 174 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 DEPDC7Q96QD5 511 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 GFM1Q96RP9 751 aaKnown RBP18.34■□□□□ 0.53
VPS33A-205ENST00000541169 INSM2Q96T92 566 aaPredicted RBP18.34■□□□□ 0.53
VPS33A-205ENST00000541169 CPNE1Q99829 537 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 AARSD1Q9BTE6 412 aaKnown RBP18.34■□□□□ 0.53
VPS33A-205ENST00000541169 KIR3DX1Q9H7L2 352 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 IMP3Q9NV31 184 aaKnown RBP18.34■□□□□ 0.53
VPS33A-205ENST00000541169 SCHIP1Q9P0W5 487 aaPredicted RBP18.34■□□□□ 0.53
VPS33A-205ENST00000541169 FAM8A1Q9UBU6 413 aa18.34■□□□□ 0.53
VPS33A-205ENST00000541169 TRBV23OR9-2A0A075B6M9 112 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 FAM221BA6H8Z2 402 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 FAM159BA6NKW6 160 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 DUX1O43812 170 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 CPNE6O95741 557 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 RPLP0P05388 317 aaKnown RBP18.33■□□□□ 0.52
VPS33A-205ENST00000541169 MYF5P13349 255 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 ACADLP28330 430 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 ECHS1P30084 290 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 GPX6P59796 221 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 MPP1Q00013 466 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 INSM1Q01101 510 aaPredicted RBP18.33■□□□□ 0.52
VPS33A-205ENST00000541169 CCDC157Q569K6 752 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 ZNF789Q5FWF6 425 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 FAM45BPQ6NSW5 357 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 CNSTQ6PJW8 725 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 WDR74Q6RFH5 385 aaPredicted RBP18.33■□□□□ 0.52
VPS33A-205ENST00000541169 DHRS13Q6UX07 377 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 TMPRSS7Q7RTY8 843 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 STRA8Q7Z7C7 330 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 PIM3Q86V86 326 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 ZBTB2Q8N680 514 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 PNPLA1Q8N8W4 532 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 ACVR1CQ8NER5 493 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 FAM45AQ8TCE6 357 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 MAGEC3Q8TD91 643 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 NAT14Q8WUY8 206 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 INPP5DQ92835 1189 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 RMDN2Q96LZ7 410 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 TMEM74Q96NL1 305 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 CYTH2Q99418 400 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 FUT8Q9BYC5 575 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 TRIT1Q9H3H1 467 aaKnown RBP18.33■□□□□ 0.52
VPS33A-205ENST00000541169 NFU1Q9UMS0 254 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 CLCA2Q9UQC9 943 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 DHRS7Q9Y394 339 aa18.33■□□□□ 0.52
VPS33A-205ENST00000541169 IGHV1OR21-1A0A087WYE8 117 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 IQCF5A8MTL0 148 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 NIPSNAP2O75323 286 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 PDHA2P29803 388 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 CCNFP41002 786 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 PREPP48147 710 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 RGS4P49798 205 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 CLCN7P51798 805 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 GBX1Q14549 363 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 CDCP2Q5VXM1 449 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 ZNF549Q6P9A3 640 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 XKR5Q6UX68 686 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 MICALCLQ6ZW33 695 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 ZC3HC1Q86WB0 502 aaKnown RBP18.32■□□□□ 0.52
VPS33A-205ENST00000541169 PLXDC1Q8IUK5 500 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 SFTPA2Q8IWL1 248 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 KRT222Q8N1A0 295 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 PHC3Q8NDX5 983 aa18.32■□□□□ 0.52
VPS33A-205ENST00000541169 OR5K2Q8NHB8 316 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms