RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 CFAP99D6REC4 459 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 MBTPS2O43462 519 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 KRT34O76011 436 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 AP2A2O94973 939 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 SNUPNO95149 360 aaKnown RBP12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 KLF8O95600 359 aaPredicted RBP12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 LINC00032P0C843 101 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 CBSLP0DN79 551 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 EPORP19235 508 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 PDHA2P29803 388 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 CBSP35520 551 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 PRLHRP49683 370 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 HTR6P50406 440 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 DPTQ07507 201 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 GRB7Q14451 532 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 WSCD2Q2TBF2 565 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 CCSMST1Q4G0I0 132 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 CHSY3Q70JA7 882 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 UBE2R2Q712K3 238 aaPredicted RBP12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 LARP4Q71RC2 724 aaKnown RBP eCLIP12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 ZNF547Q8IVP9 402 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 CPSF7Q8N684 471 aaKnown RBP12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 TEX9Q8N6V9 391 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 ACTRT2Q8TDY3 377 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 STON2Q8WXE9 905 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 C19orf60Q96EN9 201 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 FAR2Q96K12 515 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 EGFL8Q99944 293 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 BTBD10Q9BSF8 475 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 LGR4Q9BXB1 951 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 TMEM98Q9Y2Y6 226 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 PRKAB1Q9Y478 270 aa12.02□□□□□ -0.48
AP003559.1-201ENST00000540906 SLC5A10A0PJK1 596 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 TRPC5OSA6NMA1 111 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 GSC2O15499 205 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 PCCBP05166 539 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 ALDOCP09972 364 aaKnown RBP12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 MPC1LP0DKB6 136 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 COX4I1P13073 169 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 ZNF8P17098 575 aaPredicted RBP12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 VCLP18206 1134 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 NTSR1P30989 418 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 CPOXP36551 454 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 ABRQ12979 859 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 TRAF3Q13114 568 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 GTF2H2Q13888 395 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 PLEKHS1Q5SXH7 462 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 FAM46CQ5VWP2 391 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 METTL21CQ5VZV1 264 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 GTF2H2CQ6P1K8 395 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 CYB5D1Q6P9G0 228 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 OR56A4Q8NGH8 313 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 OR2T11Q8NH01 316 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 OR2T3Q8NH03 318 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 UBTD2Q8WUN7 234 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 SKA2Q8WVK7 121 aaPredicted RBP12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 AKTIPQ9H8T0 292 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 WWOXQ9NZC7 414 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 SORCS3Q9UPU3 1222 aa12.02□□□□□ -0.49
AP003559.1-201ENST00000540906 PRR23AA6NEV1 266 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 ARHGEF33A8MVX0 844 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 GFYI3L273 518 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 SYNCRIPO60506 623 aaKnown RBP12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 CCNT2O60583 730 aaKnown RBP12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 KATNA1O75449 491 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 RNASEH2AO75792 299 aaKnown RBP12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 SLCO2B1O94956 709 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 ESRRBO95718 433 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 S100BP04271 92 aaPredicted RBP12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 ENO3P13929 434 aaPredicted RBP12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 C5AR1P21730 350 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 CD72P21854 359 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 SLC25A3Q00325 362 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 PLA2G4EQ3MJ16 856 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 ZNF776Q68DI1 518 aaPredicted RBP12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 CRTC3Q6UUV7 619 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 GPRIN3Q6ZVF9 776 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 PACS2Q86VP3 889 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 CDYL2Q8N8U2 506 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 LMNTD1Q8N9Z9 388 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 FAM13CQ8NE31 585 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 OR4F6Q8NGB9 312 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 RAB7BQ96AH8 199 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 COX14Q96I36 57 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 CLPTM1LQ96KA5 538 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 ZNF382Q96SR6 550 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 CCM2Q9BSQ5 444 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 SLC12A9Q9BXP2 914 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 OSBPL6Q9BZF3 934 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 CD244Q9BZW8 370 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 RDH14Q9HBH5 336 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 POLG2Q9UHN1 485 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 TMCO1Q9UM00 188 aa12.01□□□□□ -0.49
AP003559.1-201ENST00000540906 GYG2O15488 501 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 PCDH8O95206 1070 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 ADH1BP00325 375 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 FTH1P02794 183 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 BDKRB1P46663 353 aa12□□□□□ -0.49
AP003559.1-201ENST00000540906 PIK3CGP48736 1102 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms