RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 TRIM74Q86UV6 250 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 PHYKPLQ8IUZ5 450 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 RBFAQ8N0V3 343 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 SDR16C5Q8N3Y7 309 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 SLC25A45Q8N413 288 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 ZNF548Q8NEK5 533 aaPredicted RBP10.42□□□□□ -0.74
ATL3-204ENST00000540699 DDHD1Q8NEL9 900 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 DEFB124Q8NES8 71 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 GDAP1Q8TB36 358 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 BAHD1Q8TBE0 780 aaPredicted RBP10.42□□□□□ -0.74
ATL3-204ENST00000540699 ZNF398Q8TD17 642 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.42□□□□□ -0.74
ATL3-204ENST00000540699 TSACCQ96A04 125 aaPredicted RBP10.42□□□□□ -0.74
ATL3-204ENST00000540699 TSPAN17Q96FV3 270 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 BIRC8Q96P09 236 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 GPR78Q96P69 363 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 LRRC61Q9BV99 259 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 EPN3Q9H201 632 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 P2RY12Q9H244 342 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 VPS11Q9H270 941 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 TCEAL2Q9H3H9 227 aaPredicted RBP10.42□□□□□ -0.74
ATL3-204ENST00000540699 FAM96AQ9H5X1 160 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 RMI1Q9H9A7 625 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 POPDC3Q9HBV1 291 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 TRIM39Q9HCM9 518 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 ZNF358Q9NW07 568 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 APOBEC3BQ9UH17 382 aaKnown RBP10.42□□□□□ -0.74
ATL3-204ENST00000540699 ZMIZ1Q9ULJ6 1067 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 VPS9D1Q9Y2B5 631 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 CRYL1Q9Y2S2 319 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 VWA7Q9Y334 891 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 ITPR1Q14643 2758 aa10.42□□□□□ -0.74
ATL3-204ENST00000540699 IGLV3-16A0A075B6K0 115 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 A0A087X1B8 175 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 LMO7DNF2Z398 122 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 CHUKO15111 745 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 SCAMP1O15126 338 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 AQP9O43315 295 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 NUAK1O60285 661 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 OR1I1O60431 355 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 CBFA2T3O75081 653 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 NDUFS3O75489 264 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 SLC25A14O95258 325 aaPredicted RBP10.41□□□□□ -0.74
ATL3-204ENST00000540699 TNFP01375 233 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 UGT1A6P19224 532 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 SPINK2P20155 84 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 TAC1P20366 129 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 UGT1A1P22309 533 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 UGT1A4P22310 534 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 RPS3P23396 243 aaKnown RBP eCLIP10.41□□□□□ -0.74
ATL3-204ENST00000540699 ACRV1P26436 265 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 UGT1A3P35503 534 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 UGT1A5P35504 534 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 GRK6P43250 576 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 KHDC1Q4VXA5 237 aaKnown RBP10.41□□□□□ -0.74
ATL3-204ENST00000540699 PYCR3Q53H96 274 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 LDLRAP1Q5SW96 308 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 GPRC6AQ5T6X5 926 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 LYPLAL1Q5VWZ2 237 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 C16orf46Q6P387 395 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 TMEM207Q6UWW9 146 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 ADGRG6Q86SQ4 1221 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 SERPINA9Q86WD7 417 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 HID1Q8IV36 788 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 NAXDQ8IW45 347 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 NXPE1Q8N323 547 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 FSTL5Q8N475 847 aaPredicted RBP10.41□□□□□ -0.74
ATL3-204ENST00000540699 TMEM151AQ8N4L1 468 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 ARMC2Q8NEN0 867 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 DYDC1Q8WWB3 177 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 CCDC97Q96F63 343 aaPredicted RBP10.41□□□□□ -0.74
ATL3-204ENST00000540699 UBXN10Q96LJ8 280 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 TMEM121BQ9BXQ6 578 aaPredicted RBP10.41□□□□□ -0.74
ATL3-204ENST00000540699 CLPBQ9H078 707 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 IQCGQ9H095 443 aaKnown RBP10.41□□□□□ -0.74
ATL3-204ENST00000540699 ASB8Q9H765 288 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 CYP4F12Q9HCS2 524 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 MRPL40Q9NQ50 206 aaKnown RBP10.41□□□□□ -0.74
ATL3-204ENST00000540699 IGSF5Q9NSI5 407 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 UCKL1Q9NWZ5 548 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 TRNAU1APQ9NX07 287 aaKnown RBP10.41□□□□□ -0.74
ATL3-204ENST00000540699 TMEM216Q9P0N5 145 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 ATXN10Q9UBB4 475 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 SPASTQ9UBP0 616 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 TLK1Q9UKI8 766 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 SUFUQ9UMX1 484 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 TMEM98Q9Y2Y6 226 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 PCYT1BQ9Y5K3 369 aaPredicted RBP10.41□□□□□ -0.74
ATL3-204ENST00000540699 COMMD10Q9Y6G5 202 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 RP1P56715 2156 aa10.41□□□□□ -0.74
ATL3-204ENST00000540699 UBA6A0AVT1 1052 aaPredicted RBP10.4□□□□□ -0.74
ATL3-204ENST00000540699 GMNCA6NCL1 334 aa10.4□□□□□ -0.74
ATL3-204ENST00000540699 TMEM8BA6NDV4 472 aa10.4□□□□□ -0.74
ATL3-204ENST00000540699 PRR19A6NJB7 356 aa10.4□□□□□ -0.74
ATL3-204ENST00000540699 TARM1B6A8C7 271 aa10.4□□□□□ -0.74
ATL3-204ENST00000540699 PRMT5O14744 637 aaPredicted RBP10.4□□□□□ -0.74
ATL3-204ENST00000540699 PFDN6O15212 129 aa10.4□□□□□ -0.74
ATL3-204ENST00000540699 SDC3O75056 442 aa10.4□□□□□ -0.74
ATL3-204ENST00000540699 KLHL2O95198 593 aa10.4□□□□□ -0.74
ATL3-204ENST00000540699 ESR1P03372 595 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms