RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 GUCY2DQ02846 1103 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 ZFP36L1Q07352 338 aaKnown RBP15.38■□□□□ 0.05
RPAIN-206ENST00000539417 MAP9Q49MG5 647 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 CAPN12Q6ZSI9 719 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 CTAGE6Q86UF2 777 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 CTAGE4Q8IX94 777 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 ZBED8Q8IZ13 594 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 CACTIN-AS1Q8N1I8 211 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 SEC14L1Q92503 715 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 RSC1A1Q92681 617 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 CERS2Q96G23 380 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 DEPDC7Q96QD5 511 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 TCF12Q99081 682 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 VPS37BQ9H9H4 285 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 SAYSD1Q9NPB0 183 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 ZDHHC18Q9NUE0 388 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 DMXL2Q8TDJ6 3036 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 KLHL33A6NCF5 533 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 LILRA5A6NI73 299 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 LIN7AO14910 233 aaPredicted RBP15.37■□□□□ 0.05
RPAIN-206ENST00000539417 GPC4O75487 556 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 CPNE6O95741 557 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 CAPNS1P04632 268 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 ACADLP28330 430 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 PPARGP37231 505 aaPredicted RBP15.37■□□□□ 0.05
RPAIN-206ENST00000539417 CARSP49589 748 aaKnown RBP15.37■□□□□ 0.05
RPAIN-206ENST00000539417 GFERP55789 205 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 HSPA14Q0VDF9 509 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 TUBB2AQ13885 445 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 UBAP2Q5T6F2 1119 aaKnown RBP15.37■□□□□ 0.05
RPAIN-206ENST00000539417 RCBTB1Q8NDN9 531 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 LRRC39Q96DD0 335 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 TUBB2BQ9BVA1 445 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 UCK1Q9HA47 277 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 SMYD2Q9NRG4 433 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 INTS10Q9NVR2 710 aaKnown RBP15.37■□□□□ 0.05
RPAIN-206ENST00000539417 GNPTGQ9UJJ9 305 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 TSR3Q9UJK0 312 aaKnown RBP15.37■□□□□ 0.05
RPAIN-206ENST00000539417 RUVBL2Q9Y230 463 aaKnown RBP15.37■□□□□ 0.05
RPAIN-206ENST00000539417 CELSR3Q9NYQ7 3312 aa15.37■□□□□ 0.05
RPAIN-206ENST00000539417 IGHV5-10-1A0A0J9YXX1 117 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 QSOX1O00391 747 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 TTC4O95801 387 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 MPOP05164 745 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 TPBGLP0DKB5 382 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 HGFP14210 728 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 PKMP14618 531 aaKnown RBP15.36■□□□□ 0.05
RPAIN-206ENST00000539417 SSTR1P30872 391 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 PGGT1BP53609 377 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 TIAL1Q01085 375 aaKnown RBP eCLIP15.36■□□□□ 0.052e-6■■■■□ 23
RPAIN-206ENST00000539417 RPA4Q13156 261 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 PRKG2Q13237 762 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 SQSTM1Q13501 440 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 C16orf72Q14CZ0 275 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 TEDDM1Q5T9Z0 273 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 PDZD3Q86UT5 571 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 PIM3Q86V86 326 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 C2CD4AQ8NCU7 369 aaPredicted RBP15.36■□□□□ 0.05
RPAIN-206ENST00000539417 OR5AR1Q8NGP9 310 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 GIMAP7Q8NHV1 300 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 WDR48Q8TAF3 677 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 MDM1Q8TC05 714 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 NCSTNQ92542 709 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 SH3KBP1Q96B97 665 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 PRR11Q96HE9 360 aaPredicted RBP15.36■□□□□ 0.05
RPAIN-206ENST00000539417 CNTNAP3BQ96NU0 1288 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 FERD3LQ96RJ6 166 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 NAT9Q9BTE0 207 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 CNTNAP3Q9BZ76 1288 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 STN1Q9H668 368 aaKnown RBP15.36■□□□□ 0.05
RPAIN-206ENST00000539417 SLC24A2Q9UI40 661 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 PSAT1Q9Y617 370 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 KNTC1P50748 2209 aa15.36■□□□□ 0.05
RPAIN-206ENST00000539417 KRT87PA6NCN2 255 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 UBXN7O94888 489 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 AHSGP02765 367 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 ESR1P03372 595 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 PROS1P07225 676 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 GSTM1P09488 218 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 LEPRP48357 1165 aaKnown RBP15.35■□□□□ 0.05
RPAIN-206ENST00000539417 PPM1FP49593 454 aaPredicted RBP15.35■□□□□ 0.05
RPAIN-206ENST00000539417 LIMK2P53671 638 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 EPHA4P54764 986 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 INHBCP55103 352 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 ADARP55265 1226 aaKnown RBP15.35■□□□□ 0.05
RPAIN-206ENST00000539417 GPX6P59796 221 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 GPLD1P80108 840 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 GSTM4Q03013 218 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 SYTL3Q4VX76 610 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 C3orf38Q5JPI3 329 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 RBM20Q5T481 1227 aaKnown RBP15.35■□□□□ 0.05
RPAIN-206ENST00000539417 PHF19Q5T6S3 580 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 RNF187Q5TA31 235 aaPredicted RBP15.35■□□□□ 0.05
RPAIN-206ENST00000539417 CCDC25Q86WR0 208 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 LRRC6Q86X45 466 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 CNTN4Q8IWV2 1026 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 SLC22A15Q8IZD6 547 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 LMNTD1Q8N9Z9 388 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 MNS1Q8NEH6 495 aa15.35■□□□□ 0.05
RPAIN-206ENST00000539417 OR10G6Q8NH81 332 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms