RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 PPP1R26Q5T8A7 1209 aaPredicted RBP11.74□□□□□ -0.53
NEK6-212ENST00000539416 TUBA3EQ6PEY2 450 aa11.74□□□□□ -0.53
NEK6-212ENST00000539416 PJA1Q8NG27 643 aa11.74□□□□□ -0.53
NEK6-212ENST00000539416 TRIM63Q969Q1 353 aa11.74□□□□□ -0.53
NEK6-212ENST00000539416 KCNA7Q96RP8 456 aa11.74□□□□□ -0.53
NEK6-212ENST00000539416 C11orf84Q9BUA3 381 aaPredicted RBP11.74□□□□□ -0.53
NEK6-212ENST00000539416 NXF3Q9H4D5 531 aaKnown RBP11.74□□□□□ -0.53
NEK6-212ENST00000539416 KAT8Q9H7Z6 458 aaKnown RBP11.74□□□□□ -0.53
NEK6-212ENST00000539416 FAM105AQ9NUU6 356 aa11.74□□□□□ -0.53
NEK6-212ENST00000539416 DNMT3LQ9UJW3 386 aa11.74□□□□□ -0.53
NEK6-212ENST00000539416 A0A0U1RQS6 177 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 H0Y626 953 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 POLR1CO15160 346 aaPredicted RBP11.73□□□□□ -0.53
NEK6-212ENST00000539416 HS6ST1O60243 411 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 PGLSO95336 258 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 TRIM16O95361 564 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 DNTTP04053 509 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 LCKP06239 509 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 CCDC159P0C7I6 412 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 KCNE1P15382 129 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 ST13P50502 369 aaKnown RBP11.73□□□□□ -0.53
NEK6-212ENST00000539416 SH3BP2P78314 561 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 FOXM1Q08050 763 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 EPS8Q12929 822 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 TMEM132DQ14C87 1099 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 RPS6KA2Q15349 733 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 TBRG1Q3YBR2 411 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 BCL7AQ4VC05 210 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 SPESP1Q6UW49 350 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 PRR23CQ6ZRP0 262 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 B3GNT8Q7Z7M8 397 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 TMEM179BQ7Z7N9 219 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 HID1Q8IV36 788 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 DTWD1Q8N5C7 304 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 CENPIQ92674 756 aaPredicted RBP11.73□□□□□ -0.53
NEK6-212ENST00000539416 LPIN3Q9BQK8 851 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 MCOLN1Q9GZU1 580 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 MKRN2Q9H000 416 aaKnown RBP11.73□□□□□ -0.53
NEK6-212ENST00000539416 AASDHPPTQ9NRN7 309 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 C14orf119Q9NWQ9 140 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 TOR4AQ9NXH8 423 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 NPAP1Q9NZP6 1156 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 WBP11Q9Y2W2 641 aaKnown RBP11.73□□□□□ -0.53
NEK6-212ENST00000539416 PQBP1O60828 265 aaKnown RBP11.73□□□□□ -0.53
NEK6-212ENST00000539416 RECQL4O94761 1208 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 CNTN5O94779 1100 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 C1RP00736 705 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 FTH1P02794 183 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 RAP2AP10114 183 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 HGFP14210 728 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 HTR1EP28566 365 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 GRIK1P39086 918 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 DDOSTP39656 456 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 NPY2RP49146 381 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 ATN1P54259 1190 aaPredicted RBP11.73□□□□□ -0.53
NEK6-212ENST00000539416 EEFSECP57772 596 aaKnown RBP11.73□□□□□ -0.53
NEK6-212ENST00000539416 TLE2Q04725 743 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 SYT16Q17RD7 645 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 TRIM60Q495X7 471 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 ESRP1Q6NXG1 681 aaKnown RBP11.73□□□□□ -0.53
NEK6-212ENST00000539416 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.73□□□□□ -0.53
NEK6-212ENST00000539416 FAM109AQ8N4B1 249 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 RMDN1Q96DB5 314 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 SLC7A5P2Q9GIP4 190 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 TUBB1Q9H4B7 451 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 NARFLQ9H6Q4 476 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 SDR39U1Q9NRG7 319 aaPredicted RBP11.73□□□□□ -0.53
NEK6-212ENST00000539416 RGS18Q9NS28 235 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 UBA2Q9UBT2 640 aaPredicted RBP11.73□□□□□ -0.53
NEK6-212ENST00000539416 BTRCQ9Y297 605 aa11.73□□□□□ -0.53
NEK6-212ENST00000539416 PDCD11Q14690 1871 aaKnown RBP11.72□□□□□ -0.53
NEK6-212ENST00000539416 A0A1W2PP18 115 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 KRT87PA6NCN2 255 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 LRRC14BA6NHZ5 514 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 DSCR3O14972 297 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 MATN4O95460 622 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 LINC00032P0C843 101 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 NFKB1P19838 968 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 CYP2A7P20853 494 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 SLC1A2P43004 574 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 ZFP36L2P47974 494 aaKnown RBP11.72□□□□□ -0.53
NEK6-212ENST00000539416 SLC35A2P78381 396 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 GPNMBQ14956 572 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 SMN1Q16637 294 aaKnown RBP11.72□□□□□ -0.53
NEK6-212ENST00000539416 UNC50Q53HI1 259 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 ZNF789Q5FWF6 425 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 ENPP6Q6UWR7 440 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 GRPEL2Q8TAA5 225 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 ITFG1Q8TB96 612 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 TUBGCP3Q96CW5 907 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 REXO5Q96IC2 774 aaKnown RBP11.72□□□□□ -0.53
NEK6-212ENST00000539416 RDH12Q96NR8 316 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 ASB2Q96Q27 587 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 FYTTD1Q96QD9 318 aaKnown RBP11.72□□□□□ -0.53
NEK6-212ENST00000539416 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 DUSP21Q9H596 190 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 ACOT13Q9NPJ3 140 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 ATP13A2Q9NQ11 1180 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 EHD3Q9NZN3 535 aa11.72□□□□□ -0.53
NEK6-212ENST00000539416 SLC2A6Q9UGQ3 507 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms