RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 CTSKP43235 329 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 CCT8P50990 548 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 SEC24CP53992 1094 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 ATP6V0D1P61421 351 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 B4GALNT1Q00973 533 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 HSPA14Q0VDF9 509 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 BIRC2Q13490 618 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 KRT33BQ14525 404 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 EFTUD2Q15029 972 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLPB-210ENST00000539148 ALG11Q2TAA5 492 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 METRNLQ641Q3 311 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 TTC19Q6DKK2 380 aaPredicted RBP10.04□□□□□ -0.8
CLPB-210ENST00000539148 C6orf89Q6UWU4 347 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 WASH2PQ6VEQ5 465 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 TAF8Q7Z7C8 310 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 CFAP206Q8IYR0 622 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 SLC22A18ASQ8N1D0 253 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 PELI3Q8N2H9 469 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 MDM1Q8TC05 714 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 SREK1Q8WXA9 508 aaKnown RBP10.04□□□□□ -0.8
CLPB-210ENST00000539148 OR1E3Q8WZA6 343 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 TSACCQ96A04 125 aaPredicted RBP10.04□□□□□ -0.8
CLPB-210ENST00000539148 PDLIM5Q96HC4 596 aaKnown RBP10.04□□□□□ -0.8
CLPB-210ENST00000539148 APOPT1Q96IL0 206 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 NDNQ99608 321 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 GPR21Q99679 349 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 MCMBPQ9BTE3 642 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 PITPNM3Q9BZ71 974 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 ARRDC1-AS1Q9H2J1 176 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 RASSF4Q9H2L5 321 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 NMRAL1Q9HBL8 299 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 WASH6PQ9NQA3 447 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 KLC4Q9NSK0 619 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 KLHL14Q9P2G3 628 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 MID2Q9UJV3 735 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 PRDM4Q9UKN5 801 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 MTO1Q9Y2Z2 717 aaKnown RBP10.04□□□□□ -0.8
CLPB-210ENST00000539148 COLEC10Q9Y6Z7 277 aa10.04□□□□□ -0.8
CLPB-210ENST00000539148 ZFHX2Q9C0A1 2572 aaPredicted RBP10.04□□□□□ -0.8
CLPB-210ENST00000539148 RIF1Q5UIP0 2472 aaKnown RBP10.04□□□□□ -0.8
CLPB-210ENST00000539148 ADAMTS9Q9P2N4 1935 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 A0A096LPK6 155 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 KIR2DS5A0A0G2JLQ3 304 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 A0A0G2JNG1 304 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 SYCE1LA8MT33 242 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 PDZK1P1A8MUH7 402 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 KIR2DS3K7RE56 304 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 COPEO14579 308 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 TPP1O14773 563 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 BIRC5O15392 142 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 AQP9O43315 295 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 SNX3O60493 162 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 SLCO2B1O94956 709 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 CATP04040 527 aaKnown RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 WNT1P04628 370 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 C8GP07360 202 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 LTA4HP09960 611 aaKnown RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 HIST1H2AGP0C0S8 130 aaPredicted RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 ZNF806P0C7X5 589 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 ZNF883P0CG24 379 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 MPC1LP0DKB6 136 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 TROVE2P10155 538 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLPB-210ENST00000539148 HIST1H2ADP20671 130 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 PTPRZ1P23471 2315 aaPredicted RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 MAP4P27816 1152 aaKnown RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 GABRB3P28472 473 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 PBLDP30039 288 aaPredicted RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 ACTR1BP42025 376 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 RPIAP49247 311 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 CTSCP53634 463 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 TAS2R39P59534 338 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 ACTR1AP61163 376 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 TCF15Q12870 199 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 GRIK2Q13002 908 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 EIF2B5Q13144 721 aaKnown RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 SP140Q13342 867 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 KIR2DS5Q14953 304 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 ZKSCAN8Q15776 578 aaPredicted RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 LPAL2Q16609 132 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 ZNF423Q2M1K9 1284 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 KIF19Q2TAC6 998 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 KHDC1Q4VXA5 237 aaKnown RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 LACTB2Q53H82 288 aaPredicted RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 PRRT3Q5FWE3 981 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 ZNF789Q5FWF6 425 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 CTSL3PQ5NE16 218 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 ATG16L1Q676U5 607 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 UNC5DQ6UXZ4 953 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 TRIM48Q8IWZ4 208 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 RBM12BQ8IXT5 1001 aaKnown RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 CYP4X1Q8N118 509 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 ANKRD42Q8N9B4 389 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 BANPQ8N9N5 519 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 PRSS33Q8NF86 280 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 OR6C4Q8NGE1 309 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 GPBAR1Q8TDU6 330 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 ZFPM2Q8WW38 1151 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 ISL2Q96A47 359 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 SH3KBP1Q96B97 665 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 PDXPQ96GD0 296 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms