RNA–Protein interactions for RNA: ENST00000538877.5

RAP1B-218, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-218ENST00000538877 HM13Q8TCT9 377 aa23.15■■□□□ 1.3
RAP1B-218ENST00000538877 ZNF501Q96CX3 271 aaPredicted RBP23.15■■□□□ 1.3
RAP1B-218ENST00000538877 LINC00615Q96LM1 132 aaPredicted RBP23.15■■□□□ 1.3
RAP1B-218ENST00000538877 TLR10Q9BXR5 811 aa23.15■■□□□ 1.3
RAP1B-218ENST00000538877 FAM96AQ9H5X1 160 aa23.15■■□□□ 1.3
RAP1B-218ENST00000538877 KCND1Q9NSA2 647 aa23.15■■□□□ 1.3
RAP1B-218ENST00000538877 AAR2Q9Y312 384 aaKnown RBP23.15■■□□□ 1.3
RAP1B-218ENST00000538877 COLEC10Q9Y6Z7 277 aa23.15■■□□□ 1.3
RAP1B-218ENST00000538877 USP9YO00507 2555 aaPredicted RBP23.15■■□□□ 1.3
RAP1B-218ENST00000538877 SPTAN1Q13813 2472 aaKnown RBP23.15■■□□□ 1.3
RAP1B-218ENST00000538877 KCNN4O15554 427 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 CRTAMO95727 393 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 PYGMP11217 842 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 CTNNA2P26232 953 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 NDUFS1P28331 727 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 PRLHRP49683 370 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 ZNF140P52738 457 aaPredicted RBP23.14■■□□□ 1.29
RAP1B-218ENST00000538877 EIF3EP60228 445 aaKnown RBP23.14■■□□□ 1.29
RAP1B-218ENST00000538877 COPS2P61201 443 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 CHAF1BQ13112 559 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 PRKAA1Q13131 559 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 CAPRIN2Q6IMN6 1127 aaKnown RBP23.14■■□□□ 1.29
RAP1B-218ENST00000538877 CARFQ8N187 725 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 NXPE1Q8N323 547 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 CCDC110Q8TBZ0 833 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 ULK4Q96C45 1275 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 BTRCQ9Y297 605 aa23.14■■□□□ 1.29
RAP1B-218ENST00000538877 SPTBN1Q01082 2364 aaKnown RBP23.14■■□□□ 1.29
RAP1B-218ENST00000538877 CLEC18AA5D8T8 446 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 AGAP14A8MT82 685 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 CCL22O00626 93 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 PJA2O43164 708 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 STK10O94804 968 aaKnown RBP23.13■■□□□ 1.29
RAP1B-218ENST00000538877 RBP3P10745 1247 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 ITGALP20701 1170 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 CDH3P22223 829 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 CTNNA1P35221 906 aaKnown RBP23.13■■□□□ 1.29
RAP1B-218ENST00000538877 LAMB3Q13751 1172 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 PRAMEF17Q5VTA0 474 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 DARS2Q6PI48 645 aaKnown RBP23.13■■□□□ 1.29
RAP1B-218ENST00000538877 CLEC18BQ6UXF7 455 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 SLC38A9Q8NBW4 561 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 CLEC18CQ8NCF0 446 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 OR8K5Q8NH50 307 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 THAP4Q8WY91 577 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 COPS8Q99627 209 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 CCM2Q9BSQ5 444 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 OSBPL8Q9BZF1 889 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 CHST8Q9H2A9 424 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 FANCEQ9HB96 536 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 POMT2Q9UKY4 750 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 FARSAQ9Y285 508 aaKnown RBP23.13■■□□□ 1.29
RAP1B-218ENST00000538877 HEBP2Q9Y5Z4 205 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 SHANK1Q9Y566 2161 aa23.13■■□□□ 1.29
RAP1B-218ENST00000538877 GSAPA4D1B5 854 aa23.12■■□□□ 1.29
RAP1B-218ENST00000538877 SLC9B1P1A6NJY1 282 aa23.12■■□□□ 1.29
RAP1B-218ENST00000538877 CFAP99D6REC4 459 aa23.12■■□□□ 1.29
RAP1B-218ENST00000538877 UTP20O75691 2785 aaKnown RBP23.12■■□□□ 1.29
RAP1B-218ENST00000538877 MSLNQ13421 630 aaPredicted RBP23.12■■□□□ 1.29
RAP1B-218ENST00000538877 SPARCL1Q14515 664 aa23.12■■□□□ 1.29
RAP1B-218ENST00000538877 ATCAYQ86WG3 371 aa23.12■■□□□ 1.29
RAP1B-218ENST00000538877 CCDC170Q8IYT3 715 aa23.12■■□□□ 1.29
RAP1B-218ENST00000538877 ACVR1CQ8NER5 493 aa23.12■■□□□ 1.29
RAP1B-218ENST00000538877 SPATA13Q96N96 652 aa23.12■■□□□ 1.29
RAP1B-218ENST00000538877 TBL1YQ9BQ87 522 aa23.12■■□□□ 1.29
RAP1B-218ENST00000538877 SRMSQ9H3Y6 488 aa23.12■■□□□ 1.29
RAP1B-218ENST00000538877 LUC7LQ9NQ29 371 aaKnown RBP23.12■■□□□ 1.29
RAP1B-218ENST00000538877 LATS2Q9NRM7 1088 aa23.12■■□□□ 1.29
RAP1B-218ENST00000538877 PCDHA3Q9Y5H8 950 aa23.12■■□□□ 1.29
RAP1B-218ENST00000538877 PRRC2CQ9Y520 2896 aaKnown RBP23.11■■□□□ 1.29
RAP1B-218ENST00000538877 CCDC66A2RUB6 948 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 ARGFXA6NJG6 315 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 KLK3P07288 261 aaPredicted RBP23.11■■□□□ 1.29
RAP1B-218ENST00000538877 ATP1B2P14415 290 aaPredicted RBP23.11■■□□□ 1.29
RAP1B-218ENST00000538877 CYLC1P35663 651 aaPredicted RBP23.11■■□□□ 1.29
RAP1B-218ENST00000538877 ABRQ12979 859 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 ZNF517Q6ZMY9 492 aaPredicted RBP23.11■■□□□ 1.29
RAP1B-218ENST00000538877 MICALCLQ6ZW33 695 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 SNX20Q7Z614 316 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 FAM26EQ8N5C1 309 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 LCN9Q8WX39 176 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 FERD3LQ96RJ6 166 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 SLC25A23Q9BV35 468 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 TRIM5Q9C035 493 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 COG4Q9H9E3 785 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 C1GALT1Q9NS00 363 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 EFR3BQ9Y2G0 817 aa23.11■■□□□ 1.29
RAP1B-218ENST00000538877 ICE1Q9Y2F5 2266 aa23.1■■□□□ 1.29
RAP1B-218ENST00000538877 MATN2O00339 956 aa23.1■■□□□ 1.29
RAP1B-218ENST00000538877 MC4RP32245 332 aa23.1■■□□□ 1.29
RAP1B-218ENST00000538877 HADHAP40939 763 aa23.1■■□□□ 1.29
RAP1B-218ENST00000538877 CD97P48960 835 aa23.1■■□□□ 1.29
RAP1B-218ENST00000538877 PGDP52209 483 aa23.1■■□□□ 1.29
RAP1B-218ENST00000538877 GSDMDP57764 484 aa23.1■■□□□ 1.29
RAP1B-218ENST00000538877 IZUMO3Q5VZ72 239 aa23.1■■□□□ 1.29
RAP1B-218ENST00000538877 DENND5AQ6IQ26 1287 aa23.1■■□□□ 1.29
RAP1B-218ENST00000538877 LCN10Q6JVE6 187 aa23.1■■□□□ 1.29
RAP1B-218ENST00000538877 HEXDCQ8WVB3 486 aa23.1■■□□□ 1.29
RAP1B-218ENST00000538877 CPT1BQ92523 772 aa23.1■■□□□ 1.29
RAP1B-218ENST00000538877 CLIP3Q96DZ5 547 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms