RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 SOX13Q9UN79 622 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 MED16Q9Y2X0 877 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 B3GALT1Q9Y5Z6 326 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 COL6A6A6NMZ7 2263 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 MED13Q9UHV7 2174 aa8.2□□□□□ -1.1
SPARC-208ENST00000538026 ZNF462Q96JM2 2506 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 IGHV5-51A0A0C4DH38 117 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 ZCWPW2A0A1B0GU75 182 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 EFCAB7A8K855 629 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 B4E171 279 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 CD3EAPO15446 510 aaKnown RBP8.19□□□□□ -1.1
SPARC-208ENST00000538026 DUX1O43812 170 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 GPC4O75487 556 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 AP2A2O94973 939 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 VAPBO95292 243 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 SLC2A4P14672 509 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 TCP1P17987 556 aaKnown RBP8.19□□□□□ -1.1
SPARC-208ENST00000538026 VCLP18206 1134 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 ITGB6P18564 788 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 RBMS1P29558 406 aaKnown RBP8.19□□□□□ -1.1
SPARC-208ENST00000538026 TSPAN7P41732 249 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 MLLT3P42568 568 aaPredicted RBP8.19□□□□□ -1.1
SPARC-208ENST00000538026 NSG1P42857 185 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 CAPZBP47756 277 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 MAPK10P53779 464 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 PCBP4P57723 403 aaKnown RBP8.19□□□□□ -1.1
SPARC-208ENST00000538026 MC2RQ01718 297 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 BIRC2Q13490 618 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 GRB7Q14451 532 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 BRD3Q15059 726 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 ANKRD20A4Q4UJ75 823 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 CTSL3PQ5NE16 218 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 ANKS6Q68DC2 871 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 FBXO38Q6PIJ6 1188 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 AFTPHQ6ULP2 937 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 FAM92BQ6ZTR7 304 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 CENPUQ71F23 418 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 NLRP9Q7RTR0 991 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 TIPARPQ7Z3E1 657 aaKnown RBP8.19□□□□□ -1.1
SPARC-208ENST00000538026 TMEM135Q86UB9 458 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 TRIM48Q8IWZ4 208 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 KRT222Q8N1A0 295 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 ZNF248Q8NDW4 579 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 PPHLN1Q8NEY8 458 aaKnown RBP8.19□□□□□ -1.1
SPARC-208ENST00000538026 FLVCR1-AS1Q8TAF5 88 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 HEXDCQ8WVB3 486 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 KLHL6Q8WZ60 621 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 LRRC45Q96CN5 670 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 CXorf40BQ96DE9 158 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 CMKLR1Q99788 373 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 CTRCQ99895 268 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 MENTQ9BUN1 341 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.19□□□□□ -1.1
SPARC-208ENST00000538026 RAB33BQ9H082 229 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 KIR3DX1Q9H7L2 352 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 CPNE5Q9HCH3 593 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 THSD1Q9NS62 852 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 CATSPERZQ9NTU4 200 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 IMP3Q9NV31 184 aaKnown RBP8.19□□□□□ -1.1
SPARC-208ENST00000538026 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.19□□□□□ -1.1
SPARC-208ENST00000538026 BFARQ9NZS9 450 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 EPHA6Q9UF33 1036 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 PCDHGA3Q9Y5H0 932 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 TENM4Q6N022 2769 aa8.19□□□□□ -1.1
SPARC-208ENST00000538026 CFAP99D6REC4 459 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 BTN3A3O00478 584 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 KLK10O43240 276 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 ANKRD34CP0C6C1 535 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 JMJD7P0C870 316 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 RALBP11234 206 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 MLNP12872 115 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 ZNF28P17035 718 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 AOAHP28039 575 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 HALP42357 657 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 CD151P48509 253 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 KPNA2P52292 529 aaKnown RBP8.18□□□□□ -1.1
SPARC-208ENST00000538026 TIAL1Q01085 375 aaKnown RBP eCLIP8.18□□□□□ -1.1
SPARC-208ENST00000538026 PRKG2Q13237 762 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 PTK6Q13882 451 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 BOP1Q14137 746 aaKnown RBP8.18□□□□□ -1.1
SPARC-208ENST00000538026 KCNAB1Q14722 419 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 TYSND1Q2T9J0 566 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 ZNF549Q6P9A3 640 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 PDZD3Q86UT5 571 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 RBM12BQ8IXT5 1001 aaKnown RBP8.18□□□□□ -1.1
SPARC-208ENST00000538026 AGBL5Q8NDL9 886 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 OR4E2Q8NGC2 313 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 OR5AR1Q8NGP9 310 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 LPGAT1Q92604 370 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 ART4Q93070 314 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 TMEM159Q96B96 161 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 AHCYL2Q96HN2 611 aaKnown RBP8.18□□□□□ -1.1
SPARC-208ENST00000538026 TAAR9Q96RI9 348 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 NAP1L3Q99457 506 aaPredicted RBP8.18□□□□□ -1.1
SPARC-208ENST00000538026 SLC30A3Q99726 388 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 NAPGQ99747 312 aaPredicted RBP8.18□□□□□ -1.1
SPARC-208ENST00000538026 MAP3K3Q99759 626 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 DPYSL5Q9BPU6 564 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 TRIM51Q9BSJ1 452 aa8.18□□□□□ -1.1
SPARC-208ENST00000538026 CARD6Q9BX69 1037 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms