RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 PCDHGB5Q9Y5G0 923 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 A0A075B6Q4 140 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 TPD52L2O43399 206 aaKnown RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 LGR5O75473 907 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 CD52P31358 61 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 RBM34P42696 430 aaKnown RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 GXYLT1Q4G148 440 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 IFI44LQ53G44 452 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 KLHL22Q53GT1 634 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 GALNT13Q8IUC8 556 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 GLIS3Q8NEA6 775 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 OR52J3Q8NH60 311 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ALG3Q92685 438 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 LPPQ93052 612 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 NMUR1Q9HB89 426 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 FAM105AQ9NUU6 356 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 SMCO3A2RU48 225 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 KCNU1A8MYU2 1149 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 NEDD8-MDP1E9PL57 170 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 PITPNM1O00562 1244 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 EPHB6O15197 1021 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 KLRC4O43908 158 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 CXCL14O95715 111 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ZNF12P17014 697 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 MMP8P22894 467 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 CDH12P55289 794 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 MAZP56270 477 aaKnown RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 MC1RQ01726 317 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ARL13AQ5H913 290 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 EEF1DP3Q658K8 133 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 APOBEC3HQ6NTF7 200 aaKnown RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 RHBDF2Q6PJF5 856 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 LCLAT1Q6UWP7 414 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ZYG11AQ6WRX3 759 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 DNAJB7Q7Z6W7 309 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 IQCKQ8N0W5 287 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 HAS1Q92839 578 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ZC3H10Q96K80 434 aaKnown RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 GFM1Q96RP9 751 aaKnown RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 MRPL45Q9BRJ2 306 aaKnown RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ERVW-1Q9UQF0 538 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 M0R2N6 131 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 KAT7O95251 611 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 PRAMEF12O95522 483 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 NDUFV1P49821 464 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 CCL23P55773 120 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 TAF10Q12962 218 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 GPR158Q5T848 1215 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 EIF5AL1Q6IS14 154 aaKnown RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 IRF2BP2Q7Z5L9 587 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 SPAG16Q8N0X2 631 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 CPA6Q8N4T0 437 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 TTC29Q8NA56 475 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 GLB1L3Q8NCI6 653 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 JOSD2Q8TAC2 188 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ING5Q8WYH8 240 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 GPATCH1Q9BRR8 931 aaKnown RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ATG10Q9H0Y0 220 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 HCN3Q9P1Z3 774 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 MLXQ9UH92 298 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 PCDHGB7Q9Y5F8 929 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 MYH14Q7Z406 1995 aaKnown RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 A0A0G2JPF8 293 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 HNRNPCL3B7ZW38 293 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 AKAP8O43823 692 aaKnown RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 UBXN7O94888 489 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 NFATC1O95644 943 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 HNRNPCL4P0DMR1 293 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 MAGEA2P43356 314 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 LIMK2P53671 638 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 TXNL4AP83876 142 aaKnown RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 CHIT1Q13231 466 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 TLR1Q15399 786 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 DACT2Q5SW24 774 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 LDLRAP1Q5SW96 308 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 TRIM74Q86UV6 250 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 TRIM73Q86UV7 250 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ARMC10Q8N2F6 343 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ZNF548Q8NEK5 533 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ATP6V1C2Q8NEY4 427 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 UFD1Q92890 307 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 SPATA9Q9BWV2 254 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ABI3Q9P2A4 366 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 ZNF180Q9UJW8 692 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 MED31Q9Y3C7 131 aa10.5□□□□□ -0.73
CLIP1-209ENST00000537178 PRORSD1PA6NEY8 169 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 ADM5C9JUS6 153 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 FOSL2P15408 326 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 ALAS2P22557 587 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 MXD1Q05195 221 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 CRTC2Q53ET0 693 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 C6orf52Q5T4I8 152 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 SLC22A17Q8WUG5 538 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 NKD2Q969F2 451 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 CNDP2Q96KP4 475 aaKnown RBP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 PCBD2Q9H0N5 130 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 FABP12A6NFH5 140 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 RPLP0P05388 317 aaKnown RBP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 LINGO3P0C6S8 592 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 CCR10P46092 362 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms