RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 RMDN2Q96LZ7 410 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CCM2Q9BSQ5 444 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SOHLH2Q9NX45 425 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PLAAQ9Y263 795 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 EFR3BQ9Y2G0 817 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 HEBP2Q9Y5Z4 205 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CFAP99D6REC4 459 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SGTAO43765 313 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 RBP3P10745 1247 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CTNNA1P35221 906 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ARCN1P48444 511 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 EIF3EP60228 445 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 RPS18P62269 152 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 OR4E2Q8NGC2 313 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 OR13C4Q8NGS5 318 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 HM13Q8TCT9 377 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 HEXDCQ8WVB3 486 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 MR1Q95460 341 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 MIB2Q96AX9 1013 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PPP1R2P1Q96PQ5 205 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 LATS2Q9NRM7 1088 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 FARSAQ9Y285 508 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 BTRCQ9Y297 605 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PCDHA3Q9Y5H8 950 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SEC16AO15027 2179 aa19.16■□□□□ 0.66
TNFRSF1B-204ENST00000536782 NBPF19A0A087WUL8 3843 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 KCNN4O15554 427 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 DNAJB5O75953 348 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 KLK3P07288 261 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ATP1B2P14415 290 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 POLR2CP19387 275 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ITGALP20701 1170 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CDH3P22223 829 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CYLC1P35663 651 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 HADHAP40939 763 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PRLHRP49683 370 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TMPRSS15P98073 1019 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 GPS2Q13227 327 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 MSLNQ13421 630 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 DARS2Q6PI48 645 aaKnown RBP19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 FBXO38Q6PIJ6 1188 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SNX20Q7Z614 316 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ATCAYQ86WG3 371 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 NXPE1Q8N323 547 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 LILRA3Q8N6C8 439 aaPredicted RBP19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ACVR1CQ8NER5 493 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 LRRC45Q96CN5 670 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PPM1MQ96MI6 270 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 COPS8Q99627 209 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 C19orf43Q9BQ61 176 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TRIM55Q9BYV6 548 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 OSBPL8Q9BZF1 889 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TRIM5Q9C035 493 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 FANCEQ9HB96 536 aa19.15■□□□□ 0.66
TNFRSF1B-204ENST00000536782 C17orf113A0A1B0GUU1 675 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SLC9B1P1A6NJY1 282 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 MATN2O00339 956 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PJA2O43164 708 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PTPN7P35236 360 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CD97P48960 835 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ZNF140P52738 457 aaPredicted RBP19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 MLLT10P55197 1068 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 GSDMDP57764 484 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 IZUMO3Q5VZ72 239 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SARM1Q6SZW1 724 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ZNF517Q6ZMY9 492 aaPredicted RBP19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CCDC110Q8TBZ0 833 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 LCN9Q8WX39 176 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CPT1BQ92523 772 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CALR3Q96L12 384 aaKnown RBP19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SPATA13Q96N96 652 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 LRFN5Q96NI6 719 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 FERD3LQ96RJ6 166 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 FAM118BQ9BPY3 351 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 TBL1YQ9BQ87 522 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 TLR10Q9BXR5 811 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SRMSQ9H3Y6 488 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 FAM96AQ9H5X1 160 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 C1GALT1Q9NS00 363 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 FEZ2Q9UHY8 353 aaPredicted RBP19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 POMT2Q9UKY4 750 aa19.14■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CCDC66A2RUB6 948 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 PDGFAP04085 211 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CETN2P41208 172 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 IL10RAQ13651 578 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 LAMB3Q13751 1172 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 GPR33Q49SQ1 333 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 DENND5AQ6IQ26 1287 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SLC38A9Q8NBW4 561 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 CHST8Q9H2A9 424 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ARNT2Q9HBZ2 717 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SYTL2Q9HCH5 934 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ACSS2Q9NR19 701 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 SHANK1Q9Y566 2161 aa19.13■□□□□ 0.65
TNFRSF1B-204ENST00000536782 GSAPA4D1B5 854 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ARGFXA6NJG6 315 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 MEN1O00255 615 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 IFRD1O00458 451 aaPredicted RBP19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 MAP3K7O43318 606 aa19.12■□□□□ 0.65
TNFRSF1B-204ENST00000536782 ZNF189O75820 626 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms