RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ACADLP28330 430 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 PPARGP37231 505 aaPredicted RBP17.46■□□□□ 0.39
DDX55-204ENST00000536079 HALP42357 657 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 CARSP49589 748 aaKnown RBP17.46■□□□□ 0.39
DDX55-204ENST00000536079 FOXK2Q01167 660 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 ZFP36L1Q07352 338 aaKnown RBP17.46■□□□□ 0.39
DDX55-204ENST00000536079 TEDDM1Q5T9Z0 273 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 CAPN12Q6ZSI9 719 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 SLITRK4Q8IW52 837 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 C2CD4AQ8NCU7 369 aaPredicted RBP17.46■□□□□ 0.39
DDX55-204ENST00000536079 CERS2Q96G23 380 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 DEPDC7Q96QD5 511 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 SLC30A3Q99726 388 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 NAT9Q9BTE0 207 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 VPS37BQ9H9H4 285 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 UCK1Q9HA47 277 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 GNPTGQ9UJJ9 305 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 PIKFYVEQ9Y2I7 2098 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 TRABD2BA6NFA1 517 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 LILRA5A6NI73 299 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 QSOX1O00391 747 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 LIN7AO14910 233 aaPredicted RBP17.45■□□□□ 0.38
DDX55-204ENST00000536079 ADARP55265 1226 aaKnown RBP17.45■□□□□ 0.38
DDX55-204ENST00000536079 PPP1CAP62136 330 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 TIAL1Q01085 375 aaKnown RBP eCLIP17.45■□□□□ 0.38
DDX55-204ENST00000536079 HSPA14Q0VDF9 509 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 RPA4Q13156 261 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 SQSTM1Q13501 440 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 UBAP2Q5T6F2 1119 aaKnown RBP17.45■□□□□ 0.38
DDX55-204ENST00000536079 RNF187Q5TA31 235 aaPredicted RBP17.45■□□□□ 0.38
DDX55-204ENST00000536079 PDZD3Q86UT5 571 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 LRRC6Q86X45 466 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 CNTN4Q8IWV2 1026 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 RSC1A1Q92681 617 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 SH3KBP1Q96B97 665 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 SMYD2Q9NRG4 433 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 INTS10Q9NVR2 710 aaKnown RBP17.45■□□□□ 0.38
DDX55-204ENST00000536079 MOCS1Q9NZB8 636 aa17.45■□□□□ 0.38
DDX55-204ENST00000536079 ASPMQ8IZT6 3477 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 IGHV5-10-1A0A0J9YXX1 117 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 CPNE6O95741 557 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 AHSGP02765 367 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 GSTM1P09488 218 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 TPBGLP0DKB5 382 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 PKMP14618 531 aaKnown RBP17.44■□□□□ 0.38
DDX55-204ENST00000536079 ECHS1P30084 290 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 SSTR1P30872 391 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 GPX6P59796 221 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 GSTM4Q03013 218 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 MAP9Q49MG5 647 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 CEP112Q8N8E3 955 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 OR5AR1Q8NGP9 310 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 GIMAP7Q8NHV1 300 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 WDR48Q8TAF3 677 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 FERD3LQ96RJ6 166 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 FAM167BQ9BTA0 163 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 STN1Q9H668 368 aaKnown RBP17.44■□□□□ 0.38
DDX55-204ENST00000536079 PSAT1Q9Y617 370 aa17.44■□□□□ 0.38
DDX55-204ENST00000536079 NDC80O14777 642 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 UBXN7O94888 489 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 SLCO2B1O94956 709 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 ESR1P03372 595 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 CAPNS1P04632 268 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 LEPRP48357 1165 aaKnown RBP17.43■□□□□ 0.38
DDX55-204ENST00000536079 CD151P48509 253 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 PGGT1BP53609 377 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 EPHA4P54764 986 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 INHBCP55103 352 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 GFERP55789 205 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 ABRQ12979 859 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 PRKG2Q13237 762 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 SYTL3Q4VX76 610 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 RBM20Q5T481 1227 aaKnown RBP17.43■□□□□ 0.38
DDX55-204ENST00000536079 PIM3Q86V86 326 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 CCDC25Q86WR0 208 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 SLC22A15Q8IZD6 547 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 RCBTB1Q8NDN9 531 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 OR10G6Q8NH81 332 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 CALML6Q8TD86 181 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 PYROXD1Q8WU10 500 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 NCSTNQ92542 709 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 TFGQ92734 400 aaPredicted RBP17.43■□□□□ 0.38
DDX55-204ENST00000536079 PRR11Q96HE9 360 aaPredicted RBP17.43■□□□□ 0.38
DDX55-204ENST00000536079 C9orf72Q96LT7 481 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 CCDC74BQ96LY2 380 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 NDNQ99608 321 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.43■□□□□ 0.38
DDX55-204ENST00000536079 L2HGDHQ9H9P8 463 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 PPANQ9NQ55 473 aaKnown RBP17.43■□□□□ 0.38
DDX55-204ENST00000536079 SLC24A2Q9UI40 661 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 TSR3Q9UJK0 312 aaKnown RBP17.43■□□□□ 0.38
DDX55-204ENST00000536079 RUVBL2Q9Y230 463 aaKnown RBP17.43■□□□□ 0.38
DDX55-204ENST00000536079 CEP295Q9C0D2 2601 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 UNC13CQ8NB66 2214 aa17.43■□□□□ 0.38
DDX55-204ENST00000536079 FREM2Q5SZK8 3169 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 CXorf49A8MYA2 514 aaPredicted RBP17.42■□□□□ 0.38
DDX55-204ENST00000536079 EIF3HO15372 352 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDX55-204ENST00000536079 ZNF500O60304 480 aaPredicted RBP17.42■□□□□ 0.38
DDX55-204ENST00000536079 C1QAP02745 245 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 MPOP05164 745 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms