RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SLC28A1O00337 649 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 TBL1XO60907 577 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 SLC25A14O95258 325 aaPredicted RBP15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 SEC24AO95486 1093 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 PPP3CCP48454 512 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 NFATC2Q13469 925 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 PLCL1Q15111 1095 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 TAF12Q16514 161 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 SULT1C3Q6IMI6 304 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 TMEM214Q6NUQ4 689 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 FAM151BQ6UXP7 276 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 TRIM46Q7Z4K8 759 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 CROCCP3Q8IVE0 287 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 ZNF461Q8TAF7 563 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 CNDP2Q96KP4 475 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 SH3GL1Q99961 368 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 CD244Q9BZW8 370 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 NMRK2Q9NPI5 230 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 VAPAQ9P0L0 249 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 DNMT3BQ9UBC3 853 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 FCF1Q9Y324 198 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 ANGPTL3Q9Y5C1 460 aa15.75■□□□□ 0.11
CHMP1A-202ENST00000535997 C2orf78A6NCI8 922 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 ULK1O75385 1050 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 LATS1O95835 1130 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 GUCA1CO95843 209 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 EFEMP2O95967 443 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 ALPLP05186 524 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 IL6P05231 212 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 ALPIP09923 528 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 NFKBIAP25963 317 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 DCKP27707 260 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 GNPDA1P46926 289 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 ALDH7A1P49419 539 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 CTBSQ01459 385 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 BFSP2Q13515 415 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 DAG1Q14118 895 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 CBX2Q14781 532 aaPredicted RBP15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 MAPKAPK3Q16644 382 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 ATXN7L2Q5T6C5 722 aaPredicted RBP15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 LYPLAL1Q5VWZ2 237 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 OR2T12Q8NG77 320 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 GTF2H4Q92759 462 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 TMBIM1Q969X1 311 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 TRMT2BQ96GJ1 504 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 RDH12Q96NR8 316 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 C17orf80Q9BSJ5 609 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 NTMT1Q9BV86 223 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 OSBPL6Q9BZF3 934 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 POLR1BQ9H9Y6 1135 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 ELOVL2Q9NXB9 296 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 OPTCQ9UBM4 332 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 VPS51Q9UID3 782 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 CDC14AQ9UNH5 594 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 AP3M1Q9Y2T2 418 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 H0Y858 1186 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 GAPDHSO14556 408 aaPredicted RBP15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 WDR47O94967 919 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 ITGALP20701 1170 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 RPL38P63173 70 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 RAB39AQ14964 217 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 AAK1Q2M2I8 961 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 GPRC6AQ5T6X5 926 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 KCTD8Q6ZWB6 473 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 ZDHHC13Q8IUH4 622 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 OR52E4Q8NGH9 312 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 AURKBQ96GD4 344 aaPredicted RBP15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 MYO19Q96H55 970 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 MUS81Q96NY9 551 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 EGFL8Q99944 293 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 THUMPD3Q9BV44 507 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 BOCQ9BWV1 1114 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 SOX17Q9H6I2 414 aaPredicted RBP15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 PREBQ9HCU5 417 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 IL26Q9NPH9 171 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 TLR9Q9NR96 1032 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 NEUROG3Q9Y4Z2 214 aa15.74■□□□□ 0.11
CHMP1A-202ENST00000535997 TRBV5-4A0A0C4DH59 114 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 ABLIM3O94929 683 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 TRIM16O95361 564 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 HPRP00739 348 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 EBLN1P0CF75 366 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 PTGR1Q14914 329 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 CACHD1Q5VU97 1274 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 CLDN19Q8N6F1 224 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 NUDT8Q8WV74 236 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 RHBDF1Q96CC6 855 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 ALG14Q96F25 216 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 DPY30Q9C005 99 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 GALNT8Q9NY28 637 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 IFT80Q9P2H3 777 aaPredicted RBP15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 TSR3Q9UJK0 312 aaKnown RBP15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 HEMK1Q9Y5R4 338 aaPredicted RBP15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 GSTA4O15217 222 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 DFNA5O60443 496 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 TRBC1P01850 177 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 ITGB6P18564 788 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 MTHFRP42898 656 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 SP3Q02447 781 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms