RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CHRM3P20309 590 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 TNFRSF8P28908 595 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 CD151P48509 253 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 CLCN7P51798 805 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 TIAL1Q01085 375 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHD4-203ENST00000535717 PLOD1Q02809 727 aaPredicted RBP11.79□□□□□ -0.52
CHD4-203ENST00000535717 HSPA14Q0VDF9 509 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 BIRC2Q13490 618 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 NR1D2Q14995 579 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 KBTBD12Q3ZCT8 623 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 RBM20Q5T481 1227 aaKnown RBP11.79□□□□□ -0.52
CHD4-203ENST00000535717 N4BP2L1Q5TBK1 243 aaPredicted RBP11.79□□□□□ -0.52
CHD4-203ENST00000535717 DUS1LQ6P1R4 473 aaKnown RBP11.79□□□□□ -0.52
CHD4-203ENST00000535717 OTOAQ7RTW8 1153 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 STRA8Q7Z7C7 330 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 PDZD3Q86UT5 571 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 SLC26A11Q86WA9 606 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 ZNF761Q86XN6 746 aaPredicted RBP11.79□□□□□ -0.52
CHD4-203ENST00000535717 VRK3Q8IV63 474 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 SPNS2Q8IVW8 549 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 TRIM48Q8IWZ4 208 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 GSPT2Q8IYD1 628 aaKnown RBP11.79□□□□□ -0.52
CHD4-203ENST00000535717 SLC22A15Q8IZD6 547 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 Q8N9G6 341 aaPredicted RBP11.79□□□□□ -0.52
CHD4-203ENST00000535717 EIF1ADQ8N9N8 165 aaKnown RBP11.79□□□□□ -0.52
CHD4-203ENST00000535717 ASZ1Q8WWH4 475 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 TMEM159Q96B96 161 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 CXorf40BQ96DE9 158 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 C12orf66Q96MD2 445 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 NDNQ99608 321 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 CCDC68Q9H2F9 335 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 SLC40A1Q9NP59 571 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 LATS2Q9NRM7 1088 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 IMP3Q9NV31 184 aaKnown RBP11.79□□□□□ -0.52
CHD4-203ENST00000535717 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHD4-203ENST00000535717 COMMD10Q9Y6G5 202 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 V9GYY5 206 aaPredicted RBP11.79□□□□□ -0.52
CHD4-203ENST00000535717 E5RI56 91 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 KPNA5O15131 536 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 B4GAT1O43505 415 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 SLCO2B1O94956 709 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 ACSL3O95573 720 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 VIPP01282 170 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 ACADLP28330 430 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 ALDH4A1P30038 563 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 STX2P32856 288 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 GPR3P46089 330 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 CDKN2DP55273 166 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 OR1D5P58170 312 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 CCL7P80098 99 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 E2F1Q01094 437 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 GBX1Q14549 363 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 SLMAPQ14BN4 828 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 EFTUD2Q15029 972 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHD4-203ENST00000535717 TMED2Q15363 201 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 PLEKHS1Q5SXH7 462 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 DHRS13Q6UX07 377 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 CCNI2Q6ZMN8 369 aaPredicted RBP11.78□□□□□ -0.52
CHD4-203ENST00000535717 SPRED1Q7Z699 444 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 ZC3HC1Q86WB0 502 aaKnown RBP11.78□□□□□ -0.52
CHD4-203ENST00000535717 ZBTB2Q8N680 514 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 AVL9Q8NBF6 648 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 SIDT2Q8NBJ9 832 aaKnown RBP11.78□□□□□ -0.52
CHD4-203ENST00000535717 PHC3Q8NDX5 983 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 GIMAP7Q8NHV1 300 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 CDKL2Q92772 493 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 KCNJ9Q92806 393 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 GPR21Q99679 349 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 SLC30A3Q99726 388 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 MCMBPQ9BTE3 642 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 TXLNGYQ9BZA5 131 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 STN1Q9H668 368 aaKnown RBP11.78□□□□□ -0.52
CHD4-203ENST00000535717 POT1Q9NUX5 634 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 NSMCE4AQ9NXX6 385 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 CEP295Q9C0D2 2601 aa11.78□□□□□ -0.52
CHD4-203ENST00000535717 NCOR2Q9Y618 2525 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 A0A1W2PQM1 296 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 IFRD1O00458 451 aaPredicted RBP11.77□□□□□ -0.53
CHD4-203ENST00000535717 RPLP0P05388 317 aaKnown RBP11.77□□□□□ -0.53
CHD4-203ENST00000535717 CDK4P11802 303 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 PHBP35232 272 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 CLDN6P56747 220 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 INSM1Q01101 510 aaPredicted RBP11.77□□□□□ -0.53
CHD4-203ENST00000535717 GPR18Q14330 331 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 ERCC6LQ2NKX8 1250 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 ACSBG2Q5FVE4 666 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 TMEM26Q6ZUK4 368 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 RAB44Q7Z6P3 723 aaPredicted RBP11.77□□□□□ -0.53
CHD4-203ENST00000535717 PIM3Q86V86 326 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 CTAGE3PQ8IX95 158 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 RBM12BQ8IXT5 1001 aaKnown RBP11.77□□□□□ -0.53
CHD4-203ENST00000535717 PPM1NQ8N819 430 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 GPATCH11Q8N954 259 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 ACVR1CQ8NER5 493 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 ADAMTS14Q8WXS8 1223 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 UBXN4Q92575 508 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 TFGQ92734 400 aaPredicted RBP11.77□□□□□ -0.53
CHD4-203ENST00000535717 SH3KBP1Q96B97 665 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 ATXN7L3BQ96GX2 97 aa11.77□□□□□ -0.53
CHD4-203ENST00000535717 SLC38A3Q99624 504 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms