RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 VPS39Q96JC1 886 aa11.74□□□□□ -0.53
LINC01089-204ENST00000535643 SLC25A23Q9BV35 468 aa11.74□□□□□ -0.53
LINC01089-204ENST00000535643 SHCBP1LQ9BZQ2 653 aa11.74□□□□□ -0.53
LINC01089-204ENST00000535643 RAB6CQ9H0N0 254 aa11.74□□□□□ -0.53
LINC01089-204ENST00000535643 GBA3Q9H227 469 aa11.74□□□□□ -0.53
LINC01089-204ENST00000535643 APPL1Q9UKG1 709 aa11.74□□□□□ -0.53
LINC01089-204ENST00000535643 RNF11Q9Y3C5 154 aa11.74□□□□□ -0.53
LINC01089-204ENST00000535643 PCDHGA8Q9Y5G5 932 aa11.74□□□□□ -0.53
LINC01089-204ENST00000535643 A0A087X1B8 175 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 TRIM64BA6NI03 449 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 AQP12BA6NM10 295 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.73□□□□□ -0.53
LINC01089-204ENST00000535643 TARM1B6A8C7 271 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 H7C4K7 107 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 RNASEH2AO75792 299 aaKnown RBP11.73□□□□□ -0.53
LINC01089-204ENST00000535643 ZMPSTE24O75844 475 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 APODP05090 189 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 THP07101 528 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 ERVK-10P10266 1014 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 CPB1P15086 417 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 ATP6V1B1P15313 513 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 GRM5P41594 1212 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 MS4A2Q01362 244 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 AMHR2Q16671 573 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 EIF2S3LQ2VIR3 472 aaKnown RBP11.73□□□□□ -0.53
LINC01089-204ENST00000535643 SLC10A6Q3KNW5 377 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 C6orf52Q5T4I8 152 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 NAPEPLDQ6IQ20 393 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 IYDQ6PHW0 289 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 GPR141Q7Z602 305 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 CMC1Q7Z7K0 106 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 AMIGO2Q86SJ2 522 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 AQP12AQ8IXF9 295 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 ZNF567Q8N184 647 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 CRYBG2Q8N1P7 616 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 PLD6Q8N2A8 252 aaKnown RBP11.73□□□□□ -0.53
LINC01089-204ENST00000535643 ZSCAN1Q8NBB4 408 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 PDPRQ8NCN5 879 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 GABPB2Q8TAK5 448 aaPredicted RBP11.73□□□□□ -0.53
LINC01089-204ENST00000535643 BORCS5Q969J3 196 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 MRGPRX1Q96LB2 322 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 KLHL32Q96NJ5 620 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 CYP2S1Q96SQ9 504 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 DOK1Q99704 481 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 TUBA1CQ9BQE3 449 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 TRMOQ9BU70 441 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 CCDC68Q9H2F9 335 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 LINC00597Q9H2U6 94 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 EML4Q9HC35 981 aaKnown RBP11.73□□□□□ -0.53
LINC01089-204ENST00000535643 TRPC7Q9HCX4 862 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 TM9SF3Q9HD45 589 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 TBC1D23Q9NUY8 699 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 STAP1Q9ULZ2 295 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 FAF1Q9UNN5 650 aaPredicted RBP11.73□□□□□ -0.53
LINC01089-204ENST00000535643 WDR37Q9Y2I8 494 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 PCDHGA7Q9Y5G6 932 aa11.73□□□□□ -0.53
LINC01089-204ENST00000535643 COPG1Q9Y678 874 aaKnown RBP11.73□□□□□ -0.53
LINC01089-204ENST00000535643 H3BSA7 217 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 SDHDO14521 159 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 GRAP2O75791 330 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 SRP72O76094 671 aaKnown RBP11.72□□□□□ -0.53
LINC01089-204ENST00000535643 FCGR1AP12314 374 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 MYF6P23409 242 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 RGS7P49802 495 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 CLCNKBP51801 687 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 NME5P56597 212 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 COG7P83436 770 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 KLRB1Q12918 225 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 BNIP2Q12982 314 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 DUSP4Q13115 394 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 ORC1Q13415 861 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 ZNF77Q15935 545 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 ARL13AQ5H913 290 aaPredicted RBP11.72□□□□□ -0.53
LINC01089-204ENST00000535643 C8orf82Q6P1X6 216 aaPredicted RBP11.72□□□□□ -0.53
LINC01089-204ENST00000535643 KIAA1324Q6UXG2 1013 aaKnown RBP11.72□□□□□ -0.53
LINC01089-204ENST00000535643 KDM1BQ8NB78 822 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 SNX19Q92543 992 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 NT5C3BQ969T7 300 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 SLC45A3Q96JT2 553 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 PGLYRP2Q96PD5 576 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 TCF12Q99081 682 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 ELF4Q99607 663 aaPredicted RBP11.72□□□□□ -0.53
LINC01089-204ENST00000535643 MRPL57Q9BQC6 102 aaKnown RBP11.72□□□□□ -0.53
LINC01089-204ENST00000535643 KIFC1Q9BW19 673 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 MRPL46Q9H2W6 279 aaKnown RBP11.72□□□□□ -0.53
LINC01089-204ENST00000535643 MEAF6Q9HAF1 191 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 SPAG4Q9NPE6 437 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 OLAHQ9NV23 265 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 DDX18Q9NVP1 670 aaKnown RBP11.72□□□□□ -0.53
LINC01089-204ENST00000535643 RRN3Q9NYV6 651 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 NCKIPSDQ9NZQ3 722 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 KLHL8Q9P2G9 620 aaPredicted RBP11.72□□□□□ -0.53
LINC01089-204ENST00000535643 CD300AQ9UGN4 299 aa11.72□□□□□ -0.53
LINC01089-204ENST00000535643 XPO1O14980 1071 aaKnown RBP11.71□□□□□ -0.53
LINC01089-204ENST00000535643 B4GALT5O43286 388 aa11.71□□□□□ -0.53
LINC01089-204ENST00000535643 HTRA2O43464 458 aaPredicted RBP11.71□□□□□ -0.53
LINC01089-204ENST00000535643 SOAT2O75908 522 aa11.71□□□□□ -0.53
LINC01089-204ENST00000535643 GOT1P17174 413 aa11.71□□□□□ -0.53
LINC01089-204ENST00000535643 ATP5F1P24539 256 aaPredicted RBP11.71□□□□□ -0.53
LINC01089-204ENST00000535643 PTPN3P26045 913 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms