RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 REP15Q6BDI9 236 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 TTC27Q6P3X3 843 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 RDH11Q8TC12 318 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 LHX5Q9H2C1 402 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 EIF2B4Q9UI10 523 aaKnown RBP12.47□□□□□ -0.41
SPG11-203ENST00000535302 CDH7Q9ULB5 785 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 HBS1LQ9Y450 684 aaKnown RBP12.47□□□□□ -0.41
SPG11-203ENST00000535302 OR51F1A6NGY5 319 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 RHPN2P1A8MT19 583 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 GCATO75600 419 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 IPO13O94829 963 aaKnown RBP12.47□□□□□ -0.41
SPG11-203ENST00000535302 LRIG2O94898 1065 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 SLC6A9P48067 706 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 CAPZA1P52907 286 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 CACNG1Q06432 222 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 UBXN2BQ14CS0 331 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 VARS2Q5ST30 1063 aaKnown RBP12.47□□□□□ -0.41
SPG11-203ENST00000535302 IL23RQ5VWK5 629 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 LRRC70Q7Z2Q7 622 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 CDK15Q96Q40 435 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 AIF1LQ9BQI0 150 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 IRF2BPLQ9H1B7 796 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 RHOJQ9H4E5 214 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 C3orf14Q9HBI5 128 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 APOBEC3GQ9HC16 384 aaKnown RBP12.47□□□□□ -0.41
SPG11-203ENST00000535302 SYNPO2Q9UMS6 1093 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 WASF2Q9Y6W5 498 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 ZNF536O15090 1300 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 PRAMEF33A0A0G2JMD5 474 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 B4GALT4O60513 344 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 PRAMEF10O60809 474 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 INHAP05111 366 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 RPIAP49247 311 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 PARP15Q460N3 678 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 POTEHQ6S545 545 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 SPPL2BQ8TCT7 592 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 PHPT1Q9NRX4 125 aaPredicted RBP12.47□□□□□ -0.41
SPG11-203ENST00000535302 HPF1Q9NWY4 346 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 KCTD5Q9NXV2 234 aa12.47□□□□□ -0.41
SPG11-203ENST00000535302 SLC38A8A6NNN8 435 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 ADAMTS3O15072 1205 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 NARSO43776 548 aaKnown RBP12.46□□□□□ -0.41
SPG11-203ENST00000535302 PRMT3O60678 531 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 OR4F21O95013 312 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 PLA2G16P53816 162 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 IRF9Q00978 393 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 OC90Q02509 493 aaPredicted RBP12.46□□□□□ -0.41
SPG11-203ENST00000535302 CLEC12AQ5QGZ9 265 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 GLYATQ6IB77 296 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 TMEM220Q6QAJ8 160 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 TBC1D21Q8IYX1 336 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 MREGQ8N565 214 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 NMUR2Q9GZQ4 415 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 EURLQ9NYK6 297 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 SALL4Q9UJQ4 1053 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 GNRH1P01148 92 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 MMP8P22894 467 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 ARCN1P48444 511 aaKnown RBP12.46□□□□□ -0.41
SPG11-203ENST00000535302 SGCBQ16585 318 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 SPIN3Q5JUX0 258 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 VITQ6UXI7 678 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 AP3S1Q92572 193 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 POLR3BQ9NW08 1133 aaPredicted RBP12.46□□□□□ -0.41
SPG11-203ENST00000535302 PLLPQ9Y342 182 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 ANXA4P09525 319 aaPredicted RBP12.46□□□□□ -0.41
SPG11-203ENST00000535302 ECHS1P30084 290 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 CDKN2BP42772 138 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 ASMTP46597 345 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 ADAM17P78536 824 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 SLC5A9Q2M3M2 681 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 MSANTD2Q6P1R3 559 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 APLFQ8IW19 511 aaPredicted RBP12.46□□□□□ -0.41
SPG11-203ENST00000535302 PPP1R14BQ96C90 147 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 CAPNS2Q96L46 248 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 PNPLA8Q9NP80 782 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 FSHRP23945 695 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 ARL2P36404 184 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 FAM110CQ1W6H9 321 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 HFE2Q6ZVN8 426 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 STRADAQ7RTN6 431 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 SNX27Q96L92 541 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 ADAM7Q9H2U9 754 aa12.46□□□□□ -0.41
SPG11-203ENST00000535302 FAM86C2PA6NEL3 165 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 OR1I1O60431 355 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 IGFBP5P24593 272 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 SULT2A1Q06520 285 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 INPP4AQ96PE3 977 aaPredicted RBP12.46□□□□□ -0.42
SPG11-203ENST00000535302 MRIQ9BWK5 157 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 DERAQ9Y315 318 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 PRMT5O14744 637 aaPredicted RBP12.46□□□□□ -0.42
SPG11-203ENST00000535302 DEFA5Q01523 94 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 GNA12Q03113 381 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 BNIP2Q12982 314 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 UBXN11Q5T124 520 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 KLHL35Q6PF15 583 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 IRF2BP1Q8IU81 584 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 C11orf65Q8NCR3 313 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.42
SPG11-203ENST00000535302 EIF3KQ9UBQ5 218 aaKnown RBP12.46□□□□□ -0.42
SPG11-203ENST00000535302 ZNF180Q9UJW8 692 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms