RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 SYTL3Q4VX76 610 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 N4BP2L1Q5TBK1 243 aaPredicted RBP12.83□□□□□ -0.36
TMEM258-202ENST00000535042 SLC9B2Q86UD5 537 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 SLC26A11Q86WA9 606 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 ZC3HC1Q86WB0 502 aaKnown RBP12.83□□□□□ -0.36
TMEM258-202ENST00000535042 PPM1NQ8N819 430 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 Q8N9G6 341 aaPredicted RBP12.83□□□□□ -0.36
TMEM258-202ENST00000535042 SIDT2Q8NBJ9 832 aaKnown RBP12.83□□□□□ -0.36
TMEM258-202ENST00000535042 PHC3Q8NDX5 983 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 UBXN4Q92575 508 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 KCNJ9Q92806 393 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 NAT6Q93015 286 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 TMEM159Q96B96 161 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 ATXN7L3BQ96GX2 97 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 C12orf66Q96MD2 445 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 GPR21Q99679 349 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 CCDC3Q9BQI4 270 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 FUT8Q9BYC5 575 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 CCDC68Q9H2F9 335 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 IMP3Q9NV31 184 aaKnown RBP12.83□□□□□ -0.36
TMEM258-202ENST00000535042 EVA1BQ9NVM1 165 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 PCDHGA1Q9Y5H4 931 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 PCNX2A6NKB5 2137 aa12.83□□□□□ -0.36
TMEM258-202ENST00000535042 A0A1W2PQM1 296 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 RHPN2P1A8MT19 583 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 E5RI56 91 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 VIPP01282 170 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 APOA4P06727 396 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 GP1BAP07359 652 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 PNLIPP16233 465 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 OR1D5P58170 312 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 CCL7P80098 99 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 ILKQ13418 452 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 NR1D2Q14995 579 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 ACSBG2Q5FVE4 666 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 PLEKHS1Q5SXH7 462 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 HECTD2Q5U5R9 776 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 DHRS13Q6UX07 377 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 OTOAQ7RTW8 1153 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 PDZD3Q86UT5 571 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 PIM3Q86V86 326 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 CTAGE3PQ8IX95 158 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 SLC22A15Q8IZD6 547 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 ZBTB2Q8N680 514 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 GPATCH11Q8N954 259 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 OR6C4Q8NGE1 309 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 UHMK1Q8TAS1 419 aaKnown RBP12.82□□□□□ -0.36
TMEM258-202ENST00000535042 CD200R1Q8TD46 325 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 ASZ1Q8WWH4 475 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 CDKL2Q92772 493 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 CXorf40BQ96DE9 158 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 OLFM1Q99784 485 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 EPB41L4BQ9H329 900 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 SLC40A1Q9NP59 571 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 POT1Q9NUX5 634 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 APOBEC2Q9Y235 224 aaKnown RBP12.82□□□□□ -0.36
TMEM258-202ENST00000535042 DHRS7Q9Y394 339 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 COMMD10Q9Y6G5 202 aa12.82□□□□□ -0.36
TMEM258-202ENST00000535042 ARHGEF17Q96PE2 2063 aaPredicted RBP12.82□□□□□ -0.36
TMEM258-202ENST00000535042 KPNA5O15131 536 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 OPA1O60313 960 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 ALDH4A1P30038 563 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 PHBP35232 272 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 GP5P40197 560 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 PMS2P54278 862 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 INSM1Q01101 510 aaPredicted RBP12.81□□□□□ -0.36
TMEM258-202ENST00000535042 PLOD1Q02809 727 aaPredicted RBP12.81□□□□□ -0.36
TMEM258-202ENST00000535042 ABRQ12979 859 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 BIRC2Q13490 618 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 GPR18Q14330 331 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 TMED2Q15363 201 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 WDR93Q6P2C0 686 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 TMEM26Q6ZUK4 368 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 DGLUCYQ7Z3D6 616 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 SPRED1Q7Z699 444 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 TRIM48Q8IWZ4 208 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 JPH3Q8WXH2 748 aaPredicted RBP12.81□□□□□ -0.36
TMEM258-202ENST00000535042 TFGQ92734 400 aaPredicted RBP12.81□□□□□ -0.36
TMEM258-202ENST00000535042 MRRFQ96E11 262 aaKnown RBP12.81□□□□□ -0.36
TMEM258-202ENST00000535042 VPS39Q96JC1 886 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 FERD3LQ96RJ6 166 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 NRTNQ99748 197 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 CPNE1Q99829 537 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 TBC1D10AQ9BXI6 508 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 RHOJQ9H4E5 214 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 ACSS3Q9H6R3 686 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 NSMCE4AQ9NXX6 385 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 KLHL42Q9P2K6 505 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 TSR3Q9UJK0 312 aaKnown RBP12.81□□□□□ -0.36
TMEM258-202ENST00000535042 RUVBL2Q9Y230 463 aaKnown RBP12.81□□□□□ -0.36
TMEM258-202ENST00000535042 MTO1Q9Y2Z2 717 aaKnown RBP12.81□□□□□ -0.36
TMEM258-202ENST00000535042 VWA7Q9Y334 891 aa12.81□□□□□ -0.36
TMEM258-202ENST00000535042 DMXL1Q9Y485 3027 aa12.8□□□□□ -0.36
TMEM258-202ENST00000535042 ZFC3H1O60293 1989 aaKnown RBP12.8□□□□□ -0.36
TMEM258-202ENST00000535042 IGHV1OR21-1A0A087WYE8 117 aa12.8□□□□□ -0.36
TMEM258-202ENST00000535042 FAM95CA0A1B0GW59 222 aa12.8□□□□□ -0.36
TMEM258-202ENST00000535042 IFRD1O00458 451 aaPredicted RBP12.8□□□□□ -0.36
TMEM258-202ENST00000535042 NTN3O00634 580 aaPredicted RBP12.8□□□□□ -0.36
TMEM258-202ENST00000535042 RIPK2O43353 540 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms