RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	AGAP3	Q96P47	875 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	TRIM55	Q9BYV6	548 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	LATS2	Q9NRM7	1088 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	FGF21	Q9NSA1	209 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	VPS4A	Q9UN37	437 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	TFR2	Q9UP52	801 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	HEY1	Q9Y5J3	304 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	SPO11	Q9Y5K1	396 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	UNC79	Q9P2D8	2635 aa		11.28	□□□□□ -0.6
CTNND1-238	ENST00000534647	NOTCH2	Q04721	2471 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647		A0A0A6YYK5	440 aa	Predicted RBP	11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	LRRD1	A4D1F6	860 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	TLCD2	A6NGC4	264 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	TTLL8	A6PVC2	850 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	BTNL10	A8MVZ5	291 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	APOL1	O14791	398 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	POP7	O75817	140 aa	Known RBP	11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	CEACAM4	O75871	244 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	MT-CYB	P00156	380 aa	Predicted RBP	11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	TMEM253	P0C7T8	217 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	NR2C2	P49116	596 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	TUBB4B	P68371	445 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	PDE1B	Q01064	536 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	PCSK7	Q16549	785 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	FHL5	Q5TD97	284 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	IZUMO3	Q5VZ72	239 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	BZW1	Q7L1Q6	419 aa	Known RBP	11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	HPS6	Q86YV9	775 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	TTC30B	Q8N4P2	665 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	BEND7	Q8N7W2	519 aa	Predicted RBP	11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	RASGEF1A	Q8N9B8	481 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	DDHD1	Q8NEL9	900 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	SPATA22	Q8NHS9	363 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	MAP3K3	Q99759	626 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	MAK16	Q9BXY0	300 aa	Known RBP	11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	L2HGDH	Q9H9P8	463 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	HACD3	Q9P035	362 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	IL17C	Q9P0M4	197 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	FARSA	Q9Y285	508 aa	Known RBP	11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	MAP4K5	Q9Y4K4	846 aa		11.27	□□□□□ -0.61
CTNND1-238	ENST00000534647	SPTBN1	Q01082	2364 aa	Known RBP	11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	OR5K3	A6NET4	321 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	CPNE3	O75131	537 aa	Known RBP	11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	DNAJB5	O75953	348 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	SORBS2	O94875	1100 aa	Known RBP	11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	ZBTB11	O95625	1053 aa	Predicted RBP	11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	RAB40AL	P0C0E4	278 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	PTPN3	P26045	913 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	VARS	P26640	1264 aa	Known RBP	11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	PGD	P52209	483 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	PPP1CA	P62136	330 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	PRKD1	Q15139	912 aa	Predicted RBP	11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	ZFYVE27	Q5T4F4	411 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	KDELC1	Q6UW63	502 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	GDAP1	Q8TB36	358 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	CPT1C	Q8TCG5	803 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	ADAMTS17	Q8TE56	1095 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	ZNF501	Q96CX3	271 aa	Predicted RBP	11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	SLC25A23	Q9BV35	468 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	PACSIN1	Q9BY11	444 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	CEP41	Q9BYV8	373 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	ING2	Q9H160	280 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	SYTL2	Q9HCH5	934 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	BPIFA1	Q9NP55	256 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	SMOX	Q9NWM0	555 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	FAM153A	Q9UHL3	310 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	ACSL5	Q9ULC5	683 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	BTRC	Q9Y297	605 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	JRKL	Q9Y4A0	524 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	DUSP10	Q9Y6W6	482 aa		11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	UTP20	O75691	2785 aa	Known RBP	11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.26	□□□□□ -0.61
CTNND1-238	ENST00000534647	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	UBA6	A0AVT1	1052 aa	Predicted RBP	11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	UGT1A9	O60656	530 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	PMPCB	O75439	489 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	SCRG1	O75711	98 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	AGFG2	O95081	481 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	KLK3	P07288	261 aa	Predicted RBP	11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	MSL3P1	P0C860	447 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	EBLN1	P0CF75	366 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	PYGM	P11217	842 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	MTHFD1	P11586	935 aa	Known RBP	11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	UGT1A6	P19224	532 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	UGT1A1	P22309	533 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	UGT1A4	P22310	534 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	GNLY	P22749	145 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	CD68	P34810	354 aa	Predicted RBP	11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	SPAM1	P38567	509 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	UQCRFS1	P47985	274 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	ARL4D	P49703	201 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	CTSC	P53634	463 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	WNT3A	P56704	352 aa		11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	PSMA6	P60900	246 aa	Known RBP	11.25	□□□□□ -0.61
CTNND1-238	ENST00000534647	ITGA9	Q13797	1035 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms