RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 COLEC12Q5KU26 742 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 CACHD1Q5VU97 1274 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 IRGCQ6NXR0 463 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 KLHL35Q6PF15 583 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 PACS1Q6VY07 963 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 CFAP206Q8IYR0 622 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 CLDN19Q8N6F1 224 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 RANBP9Q96S59 729 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 CCM2Q9BSQ5 444 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 COG4Q9H9E3 785 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 CASS4Q9NQ75 786 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 FAM8A1Q9UBU6 413 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 RIMKLBQ9ULI2 386 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 ZNF148Q9UQR1 794 aa13.71□□□□□ -0.21
SF3B2-215ENST00000534307 LOC101059948A0A1B0GTJ6 334 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 CCDC162PA2VCL2 907 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 OR51F1A6NGY5 319 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 AP2A2O94973 939 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 POLBP06746 335 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 ZSCAN5DPP0CG00 497 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 ZNF28P17035 718 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 MSNP26038 577 aaKnown RBP13.7□□□□□ -0.22
SF3B2-215ENST00000534307 RPL22P35268 128 aaKnown RBP13.7□□□□□ -0.22
SF3B2-215ENST00000534307 ABHD18Q0P651 414 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 SNX1Q13596 522 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 PLCL1Q15111 1095 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 TAS2R42Q7RTR8 314 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 ZSCAN1Q8NBB4 408 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 UBXN4Q92575 508 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 EXTL1Q92935 676 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 ALS2CR12Q96Q35 445 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 OR6C1Q96RD1 312 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 CD180Q99467 661 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 MAP3K3Q99759 626 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 RAB6BQ9NRW1 208 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 PAK5Q9P286 719 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 SLC2A6Q9UGQ3 507 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 ZKSCAN5Q9Y2L8 839 aa13.7□□□□□ -0.22
SF3B2-215ENST00000534307 CCDC78A2IDD5 438 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 HEATR9A2RTY3 570 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 TLCD2A6NGC4 264 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 GSTM1P09488 218 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 FOLR1P15328 257 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 NDUFS1P28331 727 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 PDHA2P29803 388 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 STAT5AP42229 794 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 GSTM4Q03013 218 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 FOXM1Q08050 763 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 NFATC3Q12968 1075 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 RPA4Q13156 261 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 ITIH4Q14624 930 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 TBR1Q16650 682 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 TSTD2Q5T7W7 516 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 KMT5CQ86Y97 462 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 CCDC89Q8N998 374 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 DNAAF3Q8N9W5 541 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 TRIM58Q8NG06 486 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 SGSM3Q96HU1 749 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 SLC45A3Q96JT2 553 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 ZNF778Q96MU6 729 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 ULBP3Q9BZM4 244 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 TRIT1Q9H3H1 467 aaKnown RBP13.69□□□□□ -0.22
SF3B2-215ENST00000534307 VPS37BQ9H9H4 285 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 EIF2B3Q9NR50 452 aaKnown RBP13.69□□□□□ -0.22
SF3B2-215ENST00000534307 HRASLS2Q9NWW9 162 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 DRG1Q9Y295 367 aaKnown RBP13.69□□□□□ -0.22
SF3B2-215ENST00000534307 HEBP2Q9Y5Z4 205 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 PRSS21Q9Y6M0 314 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 COLEC10Q9Y6Z7 277 aa13.69□□□□□ -0.22
SF3B2-215ENST00000534307 OR6C74A6NCV1 312 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 TIAF1O95411 115 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 FGGP02679 453 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 APRTP07741 180 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 ADRA1DP25100 572 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 NSG1P42857 185 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 PREPP48147 710 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 CD151P48509 253 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 KPNA2P52292 529 aaKnown RBP13.68□□□□□ -0.22
SF3B2-215ENST00000534307 LAMB3Q13751 1172 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 KCNAB1Q14722 419 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.68□□□□□ -0.22
SF3B2-215ENST00000534307 DNTTIP2Q5QJE6 756 aaKnown RBP13.68□□□□□ -0.22
SF3B2-215ENST00000534307 CERS6Q6ZMG9 384 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 PPP1R21Q6ZMI0 780 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 ZNF534Q76KX8 674 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 OOSP2Q86WS3 158 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 UNC5BQ8IZJ1 945 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 CARFQ8N187 725 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 D2HGDHQ8N465 521 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 ESX1Q8N693 406 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 ACVR1CQ8NER5 493 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 PEX13Q92968 403 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 HDAC10Q969S8 669 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 GPN2Q9H9Y4 310 aaPredicted RBP13.68□□□□□ -0.22
SF3B2-215ENST00000534307 SMARCAL1Q9NZC9 954 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 PPP2R2CQ9Y2T4 447 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 TCAF1Q9Y4C2 921 aa13.68□□□□□ -0.22
SF3B2-215ENST00000534307 ZNF891A8MT65 544 aaPredicted RBP13.67□□□□□ -0.22
SF3B2-215ENST00000534307 E7EVH7 732 aa13.67□□□□□ -0.22
SF3B2-215ENST00000534307 SPAG6O75602 509 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms