RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 GBA3Q9H227 469 aa16.42■□□□□ 0.22
CAPRIN1-216ENST00000534042 GOLPH3Q9H4A6 298 aa16.42■□□□□ 0.22
CAPRIN1-216ENST00000534042 CRLS1Q9UJA2 301 aa16.42■□□□□ 0.22
CAPRIN1-216ENST00000534042 HEBP2Q9Y5Z4 205 aa16.42■□□□□ 0.22
CAPRIN1-216ENST00000534042 RELNP78509 3460 aa16.42■□□□□ 0.22
CAPRIN1-216ENST00000534042 SLC9B1P1A6NJY1 282 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 MEN1O00255 615 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 MATN2O00339 956 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 GNLYP22749 145 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 RBL1P28749 1068 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 PTGIRP43119 386 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 UQCRFS1P47985 274 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 HADHBP55084 474 aaKnown RBP16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 PLEKHS1Q5SXH7 462 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 CCDC181Q5TID7 509 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 PRAMEF17Q5VTA0 474 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 CAPRIN2Q6IMN6 1127 aaKnown RBP16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 RANBP10Q6VN20 620 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 BBS12Q6ZW61 710 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 DAAM2Q86T65 1068 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 ACVR1CQ8NER5 493 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 HM13Q8TCT9 377 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 ULK4Q96C45 1275 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 CLIP3Q96DZ5 547 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 RBM41Q96IZ5 413 aaKnown RBP16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 APOL2Q9BQE5 337 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 HEMGNQ9BXL5 484 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 TLR10Q9BXR5 811 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 SRMSQ9H3Y6 488 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 C10orf88Q9H8K7 445 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 SYTL2Q9HCH5 934 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 MLXIPLQ9NP71 852 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 C1GALT1Q9NS00 363 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 POMT2Q9UKY4 750 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 SNX7Q9UNH6 387 aa16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.41■□□□□ 0.22
CAPRIN1-216ENST00000534042 NOTCH2Q04721 2471 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 CFAP99D6REC4 459 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 APOC4-APOC2K7ER74 178 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 DDX3YO15523 660 aaKnown RBP16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 SGTAO43765 313 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 AGFG2O95081 481 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 CRTAMO95727 393 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 APOC2P02655 101 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 RAB40ALP0C0E4 278 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 MAGEA1P43355 309 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 PREPP48147 710 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 MARCKSL1P49006 195 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 PRLHRP49683 370 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 XIAPP98170 497 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 PRPSAP1Q14558 356 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 FHL5Q5TD97 284 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 PAPD7Q5XG87 772 aaKnown RBP16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 LCN10Q6JVE6 187 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 CNGA4Q8IV77 575 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 DSELQ8IZU8 1212 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 LILRA3Q8N6C8 439 aaPredicted RBP16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 ENDOVQ8N8Q3 282 aaKnown RBP16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 ADAMTS17Q8TE56 1095 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 LCN9Q8WX39 176 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 FERD3LQ96RJ6 166 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 GORASP1Q9BQQ3 440 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 NLNQ9BYT8 704 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 G3BP2Q9UN86 482 aaKnown RBP16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 AAR2Q9Y312 384 aaKnown RBP16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 ZNF451Q9Y4E5 1061 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 PCDHGB7Q9Y5F8 929 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 CCDC88CQ9P219 2028 aa16.4■□□□□ 0.22
CAPRIN1-216ENST00000534042 HIVEP3Q5T1R4 2406 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 GSAPA4D1B5 854 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 TMEM150CB9EJG8 249 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 AKR1B15C9JRZ8 316 aaPredicted RBP16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 MAP3K7O43318 606 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 TMEM63AO94886 807 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 LCA5LO95447 670 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 ITGALP20701 1170 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 ADRA1AP35348 466 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 ABRQ12979 859 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 C4orf17Q53FE4 359 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 NXPE1Q8N323 547 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 OR13C4Q8NGS5 318 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 HEXDCQ8WVB3 486 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 COPS8Q99627 209 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 ACTR5Q9H9F9 607 aaPredicted RBP16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 SERTAD3Q9UJW9 196 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 TCFL5Q9UL49 500 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 MAP4K5Q9Y4K4 846 aa16.39■□□□□ 0.21
CAPRIN1-216ENST00000534042 ANKRD12Q6UB98 2062 aa16.38■□□□□ 0.21
CAPRIN1-216ENST00000534042 C17orf113A0A1B0GUU1 675 aa16.38■□□□□ 0.21
CAPRIN1-216ENST00000534042 CCDC66A2RUB6 948 aa16.38■□□□□ 0.21
CAPRIN1-216ENST00000534042 AGAP14A8MT82 685 aa16.38■□□□□ 0.21
CAPRIN1-216ENST00000534042 IFRD1O00458 451 aaPredicted RBP16.38■□□□□ 0.21
CAPRIN1-216ENST00000534042 DPM1O60762 260 aa16.38■□□□□ 0.21
CAPRIN1-216ENST00000534042 CEACAM4O75871 244 aa16.38■□□□□ 0.21
CAPRIN1-216ENST00000534042 SORBS2O94875 1100 aaKnown RBP16.38■□□□□ 0.21
CAPRIN1-216ENST00000534042 ATP1B2P14415 290 aaPredicted RBP16.38■□□□□ 0.21
CAPRIN1-216ENST00000534042 CYP2A7P20853 494 aa16.38■□□□□ 0.21
CAPRIN1-216ENST00000534042 PSMB4P28070 264 aa16.38■□□□□ 0.21
CAPRIN1-216ENST00000534042 PRDX3P30048 256 aaKnown RBP16.38■□□□□ 0.21
CAPRIN1-216ENST00000534042 RORAP35398 523 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms