RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 DERL2Q9GZP9 239 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 ILKAPQ9H0C8 392 aaPredicted RBP18.15■□□□□ 0.5
SMPD1-208ENST00000533123 TSR3Q9UJK0 312 aaKnown RBP18.15■□□□□ 0.5
SMPD1-208ENST00000533123 SLCO1B1Q9Y6L6 691 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 NPEPPSL1A6NEC2 478 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 CDC7O00311 574 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 OR56A5P0C7T3 313 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 ALOX15P16050 662 aaPredicted RBP18.15■□□□□ 0.5
SMPD1-208ENST00000533123 ZNF8P17098 575 aaPredicted RBP18.15■□□□□ 0.5
SMPD1-208ENST00000533123 AKT2P31751 481 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 IDH3AP50213 366 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 CFAP157Q5JU67 520 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 TMEM220Q6QAJ8 160 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 FBXL6Q8N531 539 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 DTWD2Q8NBA8 298 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 TMEM145Q8NBT3 493 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 EEF1AKMT1Q8WVE0 214 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 FOXJ1Q92949 421 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 ATOH8Q96SQ7 321 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 SIKE1Q9BRV8 207 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 PHPT1Q9NRX4 125 aaPredicted RBP18.15■□□□□ 0.5
SMPD1-208ENST00000533123 ZDHHC2Q9UIJ5 367 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 RAP2CQ9Y3L5 183 aa18.15■□□□□ 0.5
SMPD1-208ENST00000533123 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 A0A1W2PPC4 97 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 METTL12A8MUP2 240 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 MYCLP1P12525 358 aaPredicted RBP18.14■□□□□ 0.49
SMPD1-208ENST00000533123 ASPHQ12797 758 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 TUBB3Q13509 450 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 TSNQ15631 228 aaKnown RBP18.14■□□□□ 0.49
SMPD1-208ENST00000533123 GCNT7Q6ZNI0 430 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 PIWIL4Q7Z3Z4 852 aaKnown RBP18.14■□□□□ 0.49
SMPD1-208ENST00000533123 PARP9Q8IXQ6 854 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 TMEFF1Q8IYR6 380 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 CADM4Q8NFZ8 388 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 MAPK15Q8TD08 544 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 LINGO1Q96FE5 620 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 TACO1Q9BSH4 297 aaKnown RBP18.14■□□□□ 0.49
SMPD1-208ENST00000533123 ZCCHC2Q9C0B9 1178 aaKnown RBP18.14■□□□□ 0.49
SMPD1-208ENST00000533123 TFB2MQ9H5Q4 396 aaKnown RBP18.14■□□□□ 0.49
SMPD1-208ENST00000533123 COG4Q9H9E3 785 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 CCDC163A0A0D9SF12 145 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 PRAMEF26H0Y7S4 382 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 NPHS1O60500 1241 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 UNC5CO95185 931 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 T-ENOLP0DO92 83 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 MTHFD2P13995 350 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 MAOBP27338 520 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 ALDH18A1P54886 795 aaKnown RBP18.14■□□□□ 0.49
SMPD1-208ENST00000533123 WLSQ5T9L3 541 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 FAM219BQ5XKK7 198 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 KIAA1191Q96A73 305 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 CCDC126Q96EE4 140 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 ORAI3Q9BRQ5 295 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 DNAJC28Q9NX36 388 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 HAO1Q9UJM8 370 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 PRKAB1Q9Y478 270 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 PCYT1BQ9Y5K3 369 aaPredicted RBP18.14■□□□□ 0.49
SMPD1-208ENST00000533123 DMDP11532 3685 aa18.14■□□□□ 0.49
SMPD1-208ENST00000533123 TMEM202A6NGA9 273 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 TMEM233B4DJY2 109 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 VEGFDO43915 354 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 DIAPH2O60879 1101 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 AP2A2O94973 939 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 CD9P21926 228 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 RPL14P50914 215 aaKnown RBP18.13■□□□□ 0.49
SMPD1-208ENST00000533123 SNCBQ16143 134 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 SLC36A4Q6YBV0 504 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 TRAPPC5Q8IUR0 188 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 KIF2BQ8N4N8 673 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 NKAPQ8N5F7 415 aaKnown RBP18.13■□□□□ 0.49
SMPD1-208ENST00000533123 RHEBL1Q8TAI7 183 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 PPP1R36Q96LQ0 422 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 HSPA12BQ96MM6 686 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 EIF2B4Q9UI10 523 aaKnown RBP18.13■□□□□ 0.49
SMPD1-208ENST00000533123 DMTF1Q9Y222 760 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 PLXND1Q9Y4D7 1925 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 LRRC14BA6NHZ5 514 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 F8W8V4 182 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 CACNB4O00305 520 aaPredicted RBP18.13■□□□□ 0.49
SMPD1-208ENST00000533123 BTN3A1O00481 513 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 CCR7P32248 378 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 SKIV2L2P42285 1042 aaKnown RBP18.13■□□□□ 0.49
SMPD1-208ENST00000533123 IL2P60568 153 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 PRKAA1Q13131 559 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 SRSF5Q13243 272 aaKnown RBP18.13■□□□□ 0.49
SMPD1-208ENST00000533123 GTF2H3Q13889 308 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 PFKFB4Q16877 469 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 BMP8AQ7Z5Y6 402 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 SLC22A9Q8IVM8 553 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 ZNF547Q8IVP9 402 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 PTGR2Q8N8N7 351 aaPredicted RBP18.13■□□□□ 0.49
SMPD1-208ENST00000533123 PANX3Q96QZ0 392 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 TNFRSF12AQ9NP84 129 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 SPATS2LQ9NUQ6 558 aaKnown RBP18.13■□□□□ 0.49
SMPD1-208ENST00000533123 ARL8BQ9NVJ2 186 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 FAM8A1Q9UBU6 413 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 MCM8Q9UJA3 840 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 RNF112Q9ULX5 631 aa18.13■□□□□ 0.49
SMPD1-208ENST00000533123 DHRS7Q9Y394 339 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms