RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 KCTD5Q9NXV2 234 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 SUN2Q9UH99 717 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 PDE10AQ9Y233 779 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 PPIL1Q9Y3C6 166 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 TNPO3Q9Y5L0 923 aaKnown RBP13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 HELZP42694 1942 aaKnown RBP13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 TXNDC9O14530 226 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 BCAS2O75934 225 aaPredicted RBP13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 HNRNPA1P09651 372 aaKnown RBP eCLIP13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 AP5B1Q2VPB7 878 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 RABL3Q5HYI8 236 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 CELF5Q8N6W0 485 aaKnown RBP13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 PCYOX1LQ8NBM8 494 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 ELMO1Q92556 727 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 POLR3HQ9Y535 204 aaPredicted RBP13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 NME4O00746 187 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 ZNF197O14709 1029 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 SLC22A3O75751 556 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 OTCP00480 354 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 SLC2A4P14672 509 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 ITPKAP23677 461 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 NEK2P51955 445 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 DGKQP52824 942 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 KCNK10P57789 538 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 ABRQ12979 859 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 BRAT1Q6PJG6 821 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 BLOC1S3Q6QNY0 202 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 UBE2Q1Q7Z7E8 422 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 PQLC1Q8N2U9 271 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 CLHC1Q8NHS4 586 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 ULK4Q96C45 1275 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 TMEM74Q96NL1 305 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 PKP2Q99959 881 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 AIG1Q9NVV5 245 aa13.14□□□□□ -0.31
CAPRIN1-212ENST00000532820 UPK3BL1B0FP48 263 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 UPK3BL2E5RIL1 263 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 CISD3P0C7P0 127 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 VIPR1P32241 457 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 PREPP48147 710 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 RPL38P63173 70 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 PTGR1Q14914 329 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 GALNT4Q8N4A0 578 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 PHOSPHO2Q8TCD6 241 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 NUSAP1Q9BXS6 441 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 PRM3Q9NNZ6 103 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 SLC8A2Q9UPR5 921 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 USP22Q9UPT9 525 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 ATG2BQ96BY7 2078 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 ASPDHA6ND91 283 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 RFXAPO00287 272 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 STK16O75716 305 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 RSL1D1O76021 490 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 ELFN1P0C7U0 828 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 ZCCHC18P0CG32 403 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 ATP4BP51164 291 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 CTSCP53634 463 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 ST8SIA6P61647 398 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 ERVK-8P63133 956 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 NFYCQ13952 458 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 FNDC3BQ53EP0 1204 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 SLC2A7Q6PXP3 512 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 PARS2Q7L3T8 475 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 EGFL6Q8IUX8 553 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 RNF175Q8N4F7 328 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 LMNTD1Q8N9Z9 388 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 FGF13Q92913 245 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 ASB9Q96DX5 294 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 LRGUKQ96M69 825 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 P2RY13Q9BPV8 354 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 KLHL4Q9C0H6 718 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 RIC8BQ9NVN3 520 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 PSMD13Q9UNM6 376 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 LRCH1Q9Y2L9 728 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 CCDC154A6NI56 674 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 RNASEH2AO75792 299 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 PRR35P0CG20 571 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 MSH3P20585 1137 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 AOAHP28039 575 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 HOXA9P31269 272 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 ZNF805Q5CZA5 627 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 RARS2Q5T160 578 aaKnown RBP13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 VN1R2Q8NFZ6 395 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 PROKR1Q8TCW9 393 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 OSCP1Q8WVF1 389 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 LRRC58Q96CX6 371 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 ACTR8Q9H981 624 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 TMEM181Q9P2C4 612 aa13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 ZNF490Q9ULM2 529 aaPredicted RBP13.13□□□□□ -0.31
CAPRIN1-212ENST00000532820 K7EPI3 171 aa13.12□□□□□ -0.31
CAPRIN1-212ENST00000532820 FXYD1O00168 92 aa13.12□□□□□ -0.31
CAPRIN1-212ENST00000532820 ANXA5P08758 320 aa13.12□□□□□ -0.31
CAPRIN1-212ENST00000532820 EPB42P16452 691 aa13.12□□□□□ -0.31
CAPRIN1-212ENST00000532820 PSMC3P17980 439 aa13.12□□□□□ -0.31
CAPRIN1-212ENST00000532820 GRIA3P42263 894 aa13.12□□□□□ -0.31
CAPRIN1-212ENST00000532820 POLR2JP52435 117 aaKnown RBP13.12□□□□□ -0.31
CAPRIN1-212ENST00000532820 UBE3AQ05086 875 aa13.12□□□□□ -0.31
CAPRIN1-212ENST00000532820 GSTA3Q16772 222 aa13.12□□□□□ -0.31
CAPRIN1-212ENST00000532820 C6orf10Q5SRN2 563 aa13.12□□□□□ -0.31
CAPRIN1-212ENST00000532820 SULT1C3Q6IMI6 304 aa13.12□□□□□ -0.31
CAPRIN1-212ENST00000532820 NPAS3Q8IXF0 933 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms