RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 TPBGLP0DKB5 382 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 FGF5P12034 268 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 POLR2CP19387 275 aaPredicted RBP17.34■□□□□ 0.37
SMG1-203ENST00000532700 MSNP26038 577 aaKnown RBP17.34■□□□□ 0.37
SMG1-203ENST00000532700 RPL22P35268 128 aaKnown RBP17.34■□□□□ 0.37
SMG1-203ENST00000532700 GPR19Q15760 415 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 GPR33Q49SQ1 333 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 PRAMEF17Q5VTA0 474 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 PWWP2BQ6NUJ5 590 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 ZNF534Q76KX8 674 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 ZNF605Q86T29 641 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 STYXQ8WUJ0 223 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 ZDHHC12Q96GR4 267 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 SLC45A3Q96JT2 553 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 HRASLS2Q9NWW9 162 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 ZNF148Q9UQR1 794 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 RPS6KL1Q9Y6S9 549 aa17.34■□□□□ 0.37
SMG1-203ENST00000532700 HELZ2Q9BYK8 2649 aaKnown RBP17.34■□□□□ 0.37
SMG1-203ENST00000532700 BTN3A3O00478 584 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 MAP4P27816 1152 aaKnown RBP17.33■□□□□ 0.36
SMG1-203ENST00000532700 CRADDP78560 199 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 CACNG1Q06432 222 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 ABHD18Q0P651 414 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 NFATC3Q12968 1075 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 TUBB3Q13509 450 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 SEMA5AQ13591 1074 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 BRD3Q15059 726 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 DNTTIP2Q5QJE6 756 aaKnown RBP17.33■□□□□ 0.36
SMG1-203ENST00000532700 LDB1Q86U70 411 aaPredicted RBP17.33■□□□□ 0.36
SMG1-203ENST00000532700 TMEM135Q86UB9 458 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 RASGRP3Q8IV61 690 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 OR4E2Q8NGC2 313 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 LKAAEAR1Q8TD35 194 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 ZPBPQ9BS86 351 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 CCM2Q9BSQ5 444 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 XKR8Q9H6D3 395 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 CASS4Q9NQ75 786 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 RAB6BQ9NRW1 208 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 SMARCAL1Q9NZC9 954 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 CROTQ9UKG9 612 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 SNRNP200O75643 2136 aaKnown RBP17.33■□□□□ 0.36
SMG1-203ENST00000532700 PCSK5Q92824 1860 aa17.33■□□□□ 0.36
SMG1-203ENST00000532700 TLCD2A6NGC4 264 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 B8ZZF3 427 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 BTN3A1O00481 513 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 ZNF189O75820 626 aaPredicted RBP17.32■□□□□ 0.36
SMG1-203ENST00000532700 GOT2P00505 430 aaKnown RBP17.32■□□□□ 0.36
SMG1-203ENST00000532700 RALBP11234 206 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 CXCR5P32302 372 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 KCNJ1P48048 391 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 CDC20Q12834 499 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 CDH17Q12864 832 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 TSTD2Q5T7W7 516 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 LMNTD1Q8N9Z9 388 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 ZSCAN1Q8NBB4 408 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 SIDT2Q8NBJ9 832 aaKnown RBP17.32■□□□□ 0.36
SMG1-203ENST00000532700 STARD8Q92502 1023 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 HDAC10Q969S8 669 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 HGH1Q9BTY7 390 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 KLHL25Q9H0H3 589 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 STARD5Q9NSY2 213 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 MARCH4Q9P2E8 410 aaPredicted RBP17.32■□□□□ 0.36
SMG1-203ENST00000532700 LNPEPQ9UIQ6 1025 aa17.32■□□□□ 0.36
SMG1-203ENST00000532700 C17orf113A0A1B0GUU1 675 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 ZNF891A8MT65 544 aaPredicted RBP17.31■□□□□ 0.36
SMG1-203ENST00000532700 CFAP99D6REC4 459 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 NTRK1P04629 796 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 PVRP15151 417 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 STIP1P31948 543 aaKnown RBP17.31■□□□□ 0.36
SMG1-203ENST00000532700 DLSTP36957 453 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 ACVR1Q04771 509 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 PRKG2Q13237 762 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 MAP7Q14244 749 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 IL11RAQ14626 422 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 FAM199XQ6PEV8 388 aaPredicted RBP17.31■□□□□ 0.36
SMG1-203ENST00000532700 C6orf15Q6UXA7 325 aaPredicted RBP17.31■□□□□ 0.36
SMG1-203ENST00000532700 OOSP2Q86WS3 158 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 SPNS2Q8IVW8 549 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 D2HGDHQ8N465 521 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 DNAAF3Q8N9W5 541 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 SLC38A9Q8NBW4 561 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 OR52E1Q8NGJ3 308 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 OR5AR1Q8NGP9 310 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 CT55Q8WUE5 264 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 UBXN4Q92575 508 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 FERD3LQ96RJ6 166 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 ARHGAP9Q9BRR9 750 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 POMT2Q9UKY4 750 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 ICKQ9UPZ9 632 aa17.31■□□□□ 0.36
SMG1-203ENST00000532700 TCRBV7S3A2A0A539 114 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 SLC9B1P1A6NJY1 282 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 BHMG1C9JSJ3 638 aaPredicted RBP17.3■□□□□ 0.36
SMG1-203ENST00000532700 PSMD3O43242 534 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 APRTP07741 180 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 FDFT1P37268 417 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 POLE2P56282 527 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 ABRQ12979 859 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 BOP1Q14137 746 aaKnown RBP17.3■□□□□ 0.36
SMG1-203ENST00000532700 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.3■□□□□ 0.36
SMG1-203ENST00000532700 LCN10Q6JVE6 187 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms