RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 LRP5O75197 1615 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 TK2O00142 265 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 SLC28A2O43868 658 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 ZMPSTE24O75844 475 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 OR4F21O95013 312 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 TFPIP10646 304 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 COL6A2P12110 1019 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 MPSTP25325 297 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PIK3R1P27986 724 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PTGIRP43119 386 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 CCR8P51685 355 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 MBTPS1Q14703 1052 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PRAMEF13Q5VWM6 474 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 RELTQ969Z4 430 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 CCT7Q99832 543 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 SLC32A1Q9H598 525 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 SEMA3GQ9NS98 782 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 TMEM216Q9P0N5 145 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 CCL26Q9Y258 94 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 MAST2Q6P0Q8 1798 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 MYH7P12883 1935 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 TMEM150CB9EJG8 249 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 NDUFS4O43181 175 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 SRCP12931 536 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 HOXD8P13378 290 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-230ENST00000532245 ADRB3P13945 408 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 GJA4P35212 333 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 NUP107P57740 925 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 COL9A2Q14055 689 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-230ENST00000532245 FAM98BQ52LJ0 330 aaKnown RBP7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PM20D1Q6GTS8 502 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 UTP15Q8TED0 518 aaKnown RBP7.83□□□□□ -1.16
CTNND1-230ENST00000532245 SPOCK2Q92563 424 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 TMEM237Q96Q45 408 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 SIKE1Q9BRV8 207 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 XKR8Q9H6D3 395 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PAPPAQ13219 1627 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 HDAC3O15379 428 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 HNRNPRO43390 633 aaKnown RBP7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PRMT3O60678 531 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PRKCHP24723 683 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 HSD17B2P37059 387 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 TAS2R50P59544 299 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 TBCELQ5QJ74 424 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 ARHGAP40Q5TG30 622 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 ANXA8L1Q5VT79 327 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 KIAA0319Q5VV43 1072 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PRMT9Q6P2P2 845 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 SLC36A4Q6YBV0 504 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 IL22RA1Q8N6P7 574 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 SCAIQ8N9R8 606 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PNPT1Q8TCS8 783 aaKnown RBP7.83□□□□□ -1.16
CTNND1-230ENST00000532245 KIAA1143Q96AT1 154 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PHF21AQ96BD5 680 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 RNF145Q96MT1 663 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 KLHL20Q9Y2M5 609 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 H3BN98 237 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 ERN1O75460 977 aaKnown RBP7.83□□□□□ -1.16
CTNND1-230ENST00000532245 JUPP14923 745 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PKNOX1P55347 436 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 FAM189BP81408 668 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 NCEH1Q6PIU2 408 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 TRABD2AQ86V40 505 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PIM3Q86V86 326 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 EXOC3L1Q86VI1 746 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 RALGPS2Q86X27 583 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-230ENST00000532245 MFSD6LQ8IWD5 586 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PARP9Q8IXQ6 854 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 FBXO30Q8TB52 745 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 ACTRT2Q8TDY3 377 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 CDRT15Q96T59 188 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PPM1HQ9ULR3 514 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 CDC14AQ9UNH5 594 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 PCDHB3Q9Y5E6 796 aa7.83□□□□□ -1.16
CTNND1-230ENST00000532245 A0A0J9YYE9 177 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 CRHR1P34998 444 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 HNRNPKP61978 463 aaKnown RBP eCLIP7.82□□□□□ -1.166e-14■□□□□ 9.1
CTNND1-230ENST00000532245 CSTF3Q12996 717 aaKnown RBP7.82□□□□□ -1.16
CTNND1-230ENST00000532245 SLBPQ14493 270 aaKnown RBP eCLIP7.82□□□□□ -1.16
CTNND1-230ENST00000532245 SQLEQ14534 574 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 ITIH4Q14624 930 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 INTS11Q5TA45 600 aaKnown RBP7.82□□□□□ -1.16
CTNND1-230ENST00000532245 HTR3DQ70Z44 454 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 ARCQ7LC44 396 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.82□□□□□ -1.16
CTNND1-230ENST00000532245 LUZP2Q86TE4 346 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 COMMD2Q86X83 199 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 DHFR2Q86XF0 187 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 METTL27Q8N6F8 245 aaPredicted RBP7.82□□□□□ -1.16
CTNND1-230ENST00000532245 TRMT2BQ96GJ1 504 aaKnown RBP7.82□□□□□ -1.16
CTNND1-230ENST00000532245 HSPA12BQ96MM6 686 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 TGM7Q96PF1 710 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 COPG2Q9UBF2 871 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 SERTAD3Q9UJW9 196 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 MKL2Q9ULH7 1088 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 ANGPT4Q9Y264 503 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 LATO43561 262 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 MAFKO60675 156 aa7.82□□□□□ -1.16
CTNND1-230ENST00000532245 HLA-DQA2P01906 255 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms