RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TTLL9Q3SXZ7 439 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 PPM1JQ5JR12 505 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 PERM1Q5SV97 790 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 CAPRIN2Q6IMN6 1127 aaKnown RBP21.79■■□□□ 1.08
LRRK1-208ENST00000532029 UGT3A1Q6NUS8 523 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 PDZD3Q86UT5 571 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 ZBTB2Q8N680 514 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 SPDYE1Q8NFV5 336 aaPredicted RBP21.79■■□□□ 1.08
LRRK1-208ENST00000532029 ATXN7L3BQ96GX2 97 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 INSM2Q96T92 566 aaPredicted RBP21.79■■□□□ 1.08
LRRK1-208ENST00000532029 CYTH2Q99418 400 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 NDNQ99608 321 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 CPNE1Q99829 537 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 HEBP2Q9Y5Z4 205 aa21.79■■□□□ 1.08
LRRK1-208ENST00000532029 CFAP20Q9Y6A4 193 aaKnown RBP21.79■■□□□ 1.08
LRRK1-208ENST00000532029 PPM1DO15297 605 aa21.78■■□□□ 1.08
LRRK1-208ENST00000532029 GPC4O75487 556 aa21.78■■□□□ 1.08
LRRK1-208ENST00000532029 MTHFD1P11586 935 aaKnown RBP21.78■■□□□ 1.08
LRRK1-208ENST00000532029 CDK4P11802 303 aa21.78■■□□□ 1.08
LRRK1-208ENST00000532029 PNLIPP16233 465 aa21.78■■□□□ 1.08
LRRK1-208ENST00000532029 GP5P40197 560 aa21.78■■□□□ 1.08
LRRK1-208ENST00000532029 UBE2IP63279 158 aaKnown RBP21.78■■□□□ 1.08
LRRK1-208ENST00000532029 KRT33BQ14525 404 aa21.78■■□□□ 1.08
LRRK1-208ENST00000532029 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.78■■□□□ 1.08
LRRK1-208ENST00000532029 RBM12BQ8IXT5 1001 aaKnown RBP21.78■■□□□ 1.08
LRRK1-208ENST00000532029 SLC38A3Q99624 504 aa21.78■■□□□ 1.08
LRRK1-208ENST00000532029 CCDC3Q9BQI4 270 aa21.78■■□□□ 1.08
LRRK1-208ENST00000532029 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.78■■□□□ 1.08
LRRK1-208ENST00000532029 LATS2Q9NRM7 1088 aa21.78■■□□□ 1.08
LRRK1-208ENST00000532029 TOR4AQ9NXH8 423 aa21.78■■□□□ 1.08
LRRK1-208ENST00000532029 TAS2R13Q9NYV9 303 aa21.78■■□□□ 1.08
LRRK1-208ENST00000532029 C1QAP02745 245 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 VSNL1P62760 191 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 E2F1Q01094 437 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 RBM20Q5T481 1227 aaKnown RBP21.77■■□□□ 1.08
LRRK1-208ENST00000532029 FAM45BPQ6NSW5 357 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 ZNF438Q7Z4V0 828 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 SLCO6A1Q86UG4 719 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 ZC3HC1Q86WB0 502 aaKnown RBP21.77■■□□□ 1.08
LRRK1-208ENST00000532029 SLC22A15Q8IZD6 547 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 Q8N9G6 341 aaPredicted RBP21.77■■□□□ 1.08
LRRK1-208ENST00000532029 SIDT2Q8NBJ9 832 aaKnown RBP21.77■■□□□ 1.08
LRRK1-208ENST00000532029 FAM45AQ8TCE6 357 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 INPP5DQ92835 1189 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 ELMO2Q96JJ3 720 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 GPR21Q99679 349 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 ABCG4Q9H172 646 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 RHOJQ9H4E5 214 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 ACSS3Q9H6R3 686 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 KLHL42Q9P2K6 505 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 GALPQ9UBC7 116 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 RABGEF1Q9UJ41 708 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 TRMT6Q9UJA5 497 aaKnown RBP21.77■■□□□ 1.08
LRRK1-208ENST00000532029 CDYLQ9Y232 598 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 DHRS7Q9Y394 339 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 COLEC10Q9Y6Z7 277 aa21.77■■□□□ 1.08
LRRK1-208ENST00000532029 PIKFYVEQ9Y2I7 2098 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 A0A087WUV0 522 aaPredicted RBP21.76■■□□□ 1.07
LRRK1-208ENST00000532029 SLCO2B1O94956 709 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 NDUFS1P28331 727 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 GPR3P46089 330 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 PPM1FP49593 454 aaPredicted RBP21.76■■□□□ 1.07
LRRK1-208ENST00000532029 CLCN7P51798 805 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 EFTUD2Q15029 972 aaKnown RBP eCLIP21.76■■□□□ 1.07
LRRK1-208ENST00000532029 UBAP2Q5T6F2 1119 aaKnown RBP21.76■■□□□ 1.07
LRRK1-208ENST00000532029 GRTP1Q5TC63 336 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 HECTD2Q5U5R9 776 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 DUS1LQ6P1R4 473 aaKnown RBP21.76■■□□□ 1.07
LRRK1-208ENST00000532029 WDR93Q6P2C0 686 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 DGLUCYQ7Z3D6 616 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 SKA2Q8WVK7 121 aaPredicted RBP21.76■■□□□ 1.07
LRRK1-208ENST00000532029 TFGQ92734 400 aaPredicted RBP21.76■■□□□ 1.07
LRRK1-208ENST00000532029 VPS39Q96JC1 886 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 FERD3LQ96RJ6 166 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 FUT8Q9BYC5 575 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 SYNDIG1Q9H7V2 258 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 MED16Q9Y2X0 877 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 VWA7Q9Y334 891 aa21.76■■□□□ 1.07
LRRK1-208ENST00000532029 ARHGEF17Q96PE2 2063 aaPredicted RBP21.76■■□□□ 1.07
LRRK1-208ENST00000532029 FAM95CA0A1B0GW59 222 aa21.75■■□□□ 1.07
LRRK1-208ENST00000532029 ALDH4A1P30038 563 aa21.75■■□□□ 1.07
LRRK1-208ENST00000532029 ATP5DP30049 168 aa21.75■■□□□ 1.07
LRRK1-208ENST00000532029 SPRP35270 261 aaPredicted RBP21.75■■□□□ 1.07
LRRK1-208ENST00000532029 SKIV2L2P42285 1042 aaKnown RBP21.75■■□□□ 1.07
LRRK1-208ENST00000532029 PDAP1Q13442 181 aaKnown RBP21.75■■□□□ 1.07
LRRK1-208ENST00000532029 TMEM26Q6ZUK4 368 aa21.75■■□□□ 1.07
LRRK1-208ENST00000532029 ZNF761Q86XN6 746 aaPredicted RBP21.75■■□□□ 1.07
LRRK1-208ENST00000532029 VRK3Q8IV63 474 aa21.75■■□□□ 1.07
LRRK1-208ENST00000532029 UHMK1Q8TAS1 419 aaKnown RBP21.75■■□□□ 1.07
LRRK1-208ENST00000532029 MRRFQ96E11 262 aaKnown RBP21.75■■□□□ 1.07
LRRK1-208ENST00000532029 RBBP8Q99708 897 aa21.75■■□□□ 1.07
LRRK1-208ENST00000532029 TXLNGYQ9BZA5 131 aa21.75■■□□□ 1.07
LRRK1-208ENST00000532029 MVB12BQ9H7P6 319 aa21.75■■□□□ 1.07
LRRK1-208ENST00000532029 UCK1Q9HA47 277 aa21.75■■□□□ 1.07
LRRK1-208ENST00000532029 SLC40A1Q9NP59 571 aa21.75■■□□□ 1.07
LRRK1-208ENST00000532029 RRAGDQ9NQL2 400 aaPredicted RBP21.75■■□□□ 1.07
LRRK1-208ENST00000532029 KCNK4Q9NYG8 393 aa21.75■■□□□ 1.07
LRRK1-208ENST00000532029 ASF1AQ9Y294 204 aa21.75■■□□□ 1.07
LRRK1-208ENST00000532029 PRAMEF33A0A0G2JMD5 474 aa21.74■■□□□ 1.07
LRRK1-208ENST00000532029 RIPK2O43353 540 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms