RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 JAMLQ86YT9 394 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 PLXDC1Q8IUK5 500 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 TRIM48Q8IWZ4 208 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 FBXO39Q8N4B4 442 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 LSM14AQ8ND56 463 aaKnown RBP10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 SPATA4Q8NEY3 305 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 AHCYL2Q96HN2 611 aaKnown RBP10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 RMDN2Q96LZ7 410 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 NAT9Q9BTE0 207 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 TBC1D10AQ9BXI6 508 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 TWSG1Q9GZX9 223 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 WWP1Q9H0M0 922 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 MARCH4Q9P2E8 410 aaPredicted RBP10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 PCDHGA3Q9Y5H0 932 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 HEBP2Q9Y5Z4 205 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 COLEC10Q9Y6Z7 277 aa10.56□□□□□ -0.72
GPATCH4-216ENST00000531900 B4E171 279 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 NDC80O14777 642 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 KLK10O43240 276 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 TNFSF15O95150 251 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 VAPBO95292 243 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 SLC35G4P0C7Q5 338 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 ACADLP28330 430 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 CASQ1P31415 396 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 TSPAN7P41732 249 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 KCTD19Q17RG1 926 aaPredicted RBP10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 RNF187Q5TA31 235 aaPredicted RBP10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 HIBCHQ6NVY1 386 aaPredicted RBP10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 NEPROQ6NW34 567 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 ZNF449Q6P9G9 518 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 KLHL35Q6PF15 583 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 SYT10Q6XYQ8 523 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 SDCCAG8Q86SQ7 713 aaPredicted RBP10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 LILRA3Q8N6C8 439 aaPredicted RBP10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 BMPERQ8N8U9 685 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 AGBL5Q8NDL9 886 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 SPDYE1Q8NFV5 336 aaPredicted RBP10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 NAT14Q8WUY8 206 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 LPGAT1Q92604 370 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 CCDC74BQ96LY2 380 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 C12orf66Q96MD2 445 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 BIRC8Q96P09 236 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 BBC3Q96PG8 261 aaPredicted RBP10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 TFB2MQ9H5Q4 396 aaKnown RBP10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 KIR3DX1Q9H7L2 352 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 MVB12BQ9H7P6 319 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 EPB41L5Q9HCM4 733 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 LATS2Q9NRM7 1088 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 AKAP7Q9P0M2 348 aaPredicted RBP10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 SAMD15Q9P1V8 674 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 ASIC3Q9UHC3 531 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 SLC24A2Q9UI40 661 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 PSMD13Q9UNM6 376 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 CDYLQ9Y232 598 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 VPS9D1Q9Y2B5 631 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 LOXL2Q9Y4K0 774 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 RPS6KL1Q9Y6S9 549 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 FAM169AQ9Y6X4 670 aa10.55□□□□□ -0.72
GPATCH4-216ENST00000531900 IGSF10Q6WRI0 2623 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 SMG1Q96Q15 3661 aaKnown RBP10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 PRAMEF33A0A0G2JMD5 474 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 BHMG1C9JSJ3 638 aaPredicted RBP10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 PFDN6O15212 129 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 ATXN7O15265 892 aaPredicted RBP10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 SLCO2B1O94956 709 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 SEC31AO94979 1220 aaKnown RBP10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 TTC4O95801 387 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 ESR1P03372 595 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 POLBP06746 335 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 AOAHP28039 575 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 PDHA2P29803 388 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 PBLDP30039 288 aaPredicted RBP10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 BOP1Q14137 746 aaKnown RBP10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 PHF19Q5T6S3 580 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 CES3Q6UWW8 571 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 CENPUQ71F23 418 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 PRSS42Q7Z5A4 293 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 CILP2Q8IUL8 1156 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 KLHL7Q8IXQ5 586 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 SLC22A15Q8IZD6 547 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 CARFQ8N187 725 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 C17orf53Q8N3J3 647 aaPredicted RBP10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 ACVR1CQ8NER5 493 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 ASZ1Q8WWH4 475 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 SLC39A7Q92504 469 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 NCSTNQ92542 709 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 LRRC39Q96DD0 335 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 C9orf72Q96LT7 481 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 PANX3Q96QZ0 392 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 EBNA1BP2Q99848 306 aaKnown RBP10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 TSSK1BQ9BXA7 367 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 FBXO8Q9NRD0 319 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 IMP3Q9NV31 184 aaKnown RBP10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 INTS10Q9NVR2 710 aaKnown RBP10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 TMEM9Q9P0T7 183 aa10.54□□□□□ -0.72
GPATCH4-216ENST00000531900 SDK2Q58EX2 2172 aa10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 FASNP49327 2511 aaKnown RBP10.53□□□□□ -0.72
GPATCH4-216ENST00000531900 PMS2P1A4D2B8 440 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms