RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 OR8K5Q8NH50 307 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 TUBB2BQ9BVA1 445 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 TWSG1Q9GZX9 223 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 ACTL8Q9H568 366 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 ZDHHC3Q9NYG2 299 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 TP53TG5Q9Y2B4 290 aa16.39■□□□□ 0.21
CPSF1-207ENST00000531727 IGLV3-16A0A075B6K0 115 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 PIPSLA2A3N6 862 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 CDC14CA4D256 554 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 MKRN2OSH3BPM6 223 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 CCL22O00626 93 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 CPNE3O75131 537 aaKnown RBP16.38■□□□□ 0.21
CPSF1-207ENST00000531727 POLR2CP19387 275 aaPredicted RBP16.38■□□□□ 0.21
CPSF1-207ENST00000531727 MC4RP32245 332 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 ARCN1P48444 511 aaKnown RBP16.38■□□□□ 0.21
CPSF1-207ENST00000531727 PRKAA1Q13131 559 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 GPR19Q15760 415 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 TMTC4Q5T4D3 741 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 KCTD11Q693B1 232 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 ARHGEF18Q6ZSZ5 1173 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 TTC13Q8NBP0 860 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 ACRBPQ8NEB7 543 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 ACVR1CQ8NER5 493 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 OR4E2Q8NGC2 313 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 ZNF501Q96CX3 271 aaPredicted RBP16.38■□□□□ 0.21
CPSF1-207ENST00000531727 DNAJC1Q96KC8 554 aaKnown RBP16.38■□□□□ 0.21
CPSF1-207ENST00000531727 GPR87Q9BY21 358 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 AKIRIN1Q9H9L7 192 aaPredicted RBP16.38■□□□□ 0.21
CPSF1-207ENST00000531727 LATS2Q9NRM7 1088 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 KCND1Q9NSA2 647 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 SOHLH2Q9NX45 425 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 AMFRQ9UKV5 643 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 BTRCQ9Y297 605 aa16.38■□□□□ 0.21
CPSF1-207ENST00000531727 TRBV5-4A0A0C4DH59 114 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 GOLGA6L9A6NEM1 432 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 H7C0S8 307 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 MATN2O00339 956 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 RFPL1O75677 317 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 SCRG1O75711 98 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 ACRV1P26436 265 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 PTPN4P29074 926 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 CDKN1CP49918 316 aaPredicted RBP16.37■□□□□ 0.21
CPSF1-207ENST00000531727 PMS2P54278 862 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 PARP6Q2NL67 630 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 ZNF658BQ4V348 819 aaPredicted RBP16.37■□□□□ 0.21
CPSF1-207ENST00000531727 ZRANB3Q5FWF4 1079 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 FAM199XQ6PEV8 388 aaPredicted RBP16.37■□□□□ 0.21
CPSF1-207ENST00000531727 FBXO38Q6PIJ6 1188 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 TMEM126BQ8IUX1 230 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 FAM71DQ8N9W8 422 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 SEC14L1Q92503 715 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 PPM1MQ96MI6 270 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 RUFY1Q96T51 708 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 OR52A5Q9H2C5 316 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 LRRC40Q9H9A6 602 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 COG4Q9H9E3 785 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 VPS37BQ9H9H4 285 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 C1GALT1Q9NS00 363 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 NLE1Q9NVX2 485 aaPredicted RBP16.37■□□□□ 0.21
CPSF1-207ENST00000531727 POMT2Q9UKY4 750 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 MAN2B2Q9Y2E5 1009 aa16.37■□□□□ 0.21
CPSF1-207ENST00000531727 SPTA1P02549 2419 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 METTL18O95568 372 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 PTMAP06454 111 aaKnown RBP16.36■□□□□ 0.21
CPSF1-207ENST00000531727 CDH3P22223 829 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 FOXK1P85037 733 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 KLF1Q13351 362 aaPredicted RBP16.36■□□□□ 0.21
CPSF1-207ENST00000531727 UGT8Q16880 541 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 TCTN3Q6NUS6 607 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 PEX26Q7Z412 305 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 KIAA1328Q86T90 577 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 SYVN1Q86TM6 617 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 SERPINA9Q86WD7 417 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 APLFQ8IW19 511 aaPredicted RBP16.36■□□□□ 0.21
CPSF1-207ENST00000531727 UBL4BQ8N7F7 174 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 LCN9Q8WX39 176 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 FERD3LQ96RJ6 166 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 SRMSQ9H3Y6 488 aa16.36■□□□□ 0.21
CPSF1-207ENST00000531727 GSAPA4D1B5 854 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 SLC9B1P1A6NJY1 282 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 MIF4GDA9UHW6 222 aaKnown RBP16.35■□□□□ 0.21
CPSF1-207ENST00000531727 K7EM74 188 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 IFRD1O00458 451 aaPredicted RBP16.35■□□□□ 0.21
CPSF1-207ENST00000531727 PRSS56P0CW18 603 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 TPH1P17752 444 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 NR1D1P20393 614 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 CD151P48509 253 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 RPS18P62269 152 aaKnown RBP16.35■□□□□ 0.21
CPSF1-207ENST00000531727 RPS15P62841 145 aaKnown RBP16.35■□□□□ 0.21
CPSF1-207ENST00000531727 KLRB1Q12918 225 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 RPA4Q13156 261 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 GPS2Q13227 327 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 LAMB3Q13751 1172 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 POU6F1Q14863 301 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 P3H1Q32P28 736 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 ZNF449Q6P9G9 518 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 ZNF517Q6ZMY9 492 aaPredicted RBP16.35■□□□□ 0.21
CPSF1-207ENST00000531727 MICALCLQ6ZW33 695 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 TAS2R42Q7RTR8 314 aa16.35■□□□□ 0.21
CPSF1-207ENST00000531727 SYCE1Q8N0S2 351 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms