RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CDC14AQ9UNH5 594 aa4.29□□□□□ -1.72
USP47-211ENST00000531513 HEPACAM2A8MVW5 462 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 FAM86B1E9PN63 330 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 J3KR12 359 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 SLC33A1O00400 549 aaPredicted RBP4.28□□□□□ -1.72
USP47-211ENST00000531513 HS3ST1O14792 307 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 LDB2O43679 373 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 ZBTB14O43829 449 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 SSX4O60224 188 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 ZIC3O60481 467 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 RTN2O75298 545 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 OLFM2O95897 454 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 VIMP08670 466 aaKnown RBP4.28□□□□□ -1.72
USP47-211ENST00000531513 FAM86B2P0C5J1 330 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 GNAZP19086 355 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 ITGB8P26012 769 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 BDKRB2P30411 391 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 CASP3P42574 277 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 RASSF2P50749 326 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 STX1BP61266 288 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 SNRPEP62304 92 aaKnown RBP4.28□□□□□ -1.72
USP47-211ENST00000531513 ASIC1P78348 528 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 FOXM1Q08050 763 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 RPA4Q13156 261 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 LASP1Q14847 261 aaKnown RBP4.28□□□□□ -1.72
USP47-211ENST00000531513 PTGR1Q14914 329 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 PARP10Q53GL7 1025 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 PPP6R3Q5H9R7 873 aaPredicted RBP4.28□□□□□ -1.72
USP47-211ENST00000531513 ALS2CLQ60I27 953 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 CAPRIN2Q6IMN6 1127 aaKnown RBP4.28□□□□□ -1.72
USP47-211ENST00000531513 RAB12Q6IQ22 244 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 ZNF534Q76KX8 674 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 NUP54Q7Z3B4 507 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 NRROSQ86YC3 692 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 DZIP1Q86YF9 867 aaKnown RBP4.28□□□□□ -1.72
USP47-211ENST00000531513 FBXL14Q8N1E6 418 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 GCSAMQ8N6F7 178 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 PAPD5Q8NDF8 572 aaKnown RBP4.28□□□□□ -1.72
USP47-211ENST00000531513 SPATA20Q8TB22 786 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.28□□□□□ -1.72
USP47-211ENST00000531513 SEPT1Q8WYJ6 367 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 DNASE1L2Q92874 299 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 TAAR8Q969N4 342 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 SLAMF9Q96A28 289 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 PRMT6Q96LA8 375 aaPredicted RBP4.28□□□□□ -1.72
USP47-211ENST00000531513 OR6C1Q96RD1 312 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 SEPHS2Q99611 448 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 TMEM206Q9H813 350 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 FZD3Q9NPG1 666 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 CNIH4Q9P003 139 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 POLLQ9UGP5 575 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 B3GALT5Q9Y2C3 310 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 PCDHGA1Q9Y5H4 931 aa4.28□□□□□ -1.72
USP47-211ENST00000531513 SRPRBQ9Y5M8 271 aaKnown RBP4.28□□□□□ -1.72
USP47-211ENST00000531513 FEZF1A0PJY2 475 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 ANKUB1A6NFN9 424 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 C5orf52A6NGY3 159 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 FAM90A26D6RGX4 464 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 TMEM189-UBE2V1I3L0A0 370 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 CLDN4O14493 209 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 TO15178 435 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 SLC16A5O15375 505 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 KCNN4O15554 427 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 ASAP2O43150 1006 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 ZBTB43O43298 467 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 MED24O75448 989 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 MOCS3O95396 460 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 VNN2O95498 520 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 STX2P32856 288 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 SNU13P55769 128 aaKnown RBP4.27□□□□□ -1.73
USP47-211ENST00000531513 HNRNPH2P55795 449 aaKnown RBP4.27□□□□□ -1.73
USP47-211ENST00000531513 GAGE2BQ13066 116 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 CBX3Q13185 183 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 UBE2V1Q13404 147 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 EFNB3Q15768 340 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 UGCGQ16739 394 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 GAGE2EQ4V326 116 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 CCDC158Q5M9N0 1113 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 FAM109BQ6ICB4 259 aaPredicted RBP4.27□□□□□ -1.73
USP47-211ENST00000531513 GAGE2AQ6NT46 116 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 KCTD18Q6PI47 426 aaPredicted RBP4.27□□□□□ -1.73
USP47-211ENST00000531513 SLC36A4Q6YBV0 504 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 FOXRED2Q8IWF2 684 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 AADATQ8N5Z0 425 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 PCDH20Q8N6Y1 951 aaKnown RBP4.27□□□□□ -1.73
USP47-211ENST00000531513 TRIML1Q8N9V2 468 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 SPDL1Q96EA4 605 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 LRFN5Q96NI6 719 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 MUS81Q96NY9 551 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 FEVQ99581 238 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 C16orf70Q9BSU1 422 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 MCM9Q9NXL9 1143 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 VPS18Q9P253 973 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 RCC2Q9P258 522 aaKnown RBP4.27□□□□□ -1.73
USP47-211ENST00000531513 STK26Q9P289 416 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 GAGE2DQ9UEU5 116 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 ITGA11Q9UKX5 1188 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 PAM16Q9Y3D7 125 aa4.27□□□□□ -1.73
USP47-211ENST00000531513 A0A1W2PPQ1 181 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 MS4A18H0YCH9 400 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms