RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 TXLNGYQ9BZA5 131 aa14.15□□□□□ -0.14
CPSF1-206ENST00000531480 SLC40A1Q9NP59 571 aa14.15□□□□□ -0.14
CPSF1-206ENST00000531480 NSMCE4AQ9NXX6 385 aa14.15□□□□□ -0.14
CPSF1-206ENST00000531480 ZFATQ9P243 1243 aa14.15□□□□□ -0.14
CPSF1-206ENST00000531480 LRIT1Q9P2V4 623 aa14.15□□□□□ -0.14
CPSF1-206ENST00000531480 NFU1Q9UMS0 254 aa14.15□□□□□ -0.14
CPSF1-206ENST00000531480 WASF3Q9UPY6 502 aa14.15□□□□□ -0.14
CPSF1-206ENST00000531480 PSAT1Q9Y617 370 aa14.15□□□□□ -0.14
CPSF1-206ENST00000531480 UNC13CQ8NB66 2214 aa14.15□□□□□ -0.14
CPSF1-206ENST00000531480 LILRA5A6NI73 299 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 OR52A4PA6NMU1 304 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 NIPSNAP2O75323 286 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 TRIM16O95361 564 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 F7P08709 466 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-206ENST00000531480 MTHFD1P11586 935 aaKnown RBP14.14□□□□□ -0.15
CPSF1-206ENST00000531480 HALP42357 657 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 HHEXQ03014 270 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 SEPT7Q16181 437 aaKnown RBP14.14□□□□□ -0.15
CPSF1-206ENST00000531480 PLEKHS1Q5SXH7 462 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 N4BP2L1Q5TBK1 243 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-206ENST00000531480 CDCP2Q5VXM1 449 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 SPRED1Q7Z699 444 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 PDZD3Q86UT5 571 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 KRT222Q8N1A0 295 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 SPDYE1Q8NFV5 336 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-206ENST00000531480 WDR48Q8TAF3 677 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 SH3KBP1Q96B97 665 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 CCDC3Q9BQI4 270 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 WWP1Q9H0M0 922 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 CDC42EP4Q9H3Q1 356 aaKnown RBP14.14□□□□□ -0.15
CPSF1-206ENST00000531480 NINJ2Q9NZG7 142 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 SLC17A6Q9P2U8 582 aa14.14□□□□□ -0.15
CPSF1-206ENST00000531480 TPRP12270 2363 aaKnown RBP14.14□□□□□ -0.15
CPSF1-206ENST00000531480 CPED1A4D0V7 1026 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 CXorf49A8MYA2 514 aaPredicted RBP14.13□□□□□ -0.15
CPSF1-206ENST00000531480 OPA1O60313 960 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 SLC35G4P0C7Q5 338 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 MYBL2P10244 700 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 STX2P32856 288 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 PREPP48147 710 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 EPHA4P54764 986 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 NAB1Q13506 487 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 SLMAPQ14BN4 828 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 KYNUQ16719 465 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 CLPPQ16740 277 aaPredicted RBP14.13□□□□□ -0.15
CPSF1-206ENST00000531480 TMEM26Q6ZUK4 368 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 ZC3HC1Q86WB0 502 aaKnown RBP14.13□□□□□ -0.15
CPSF1-206ENST00000531480 VRK3Q8IV63 474 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 GIMAP7Q8NHV1 300 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 HNRNPLLQ8WVV9 542 aaKnown RBP14.13□□□□□ -0.15
CPSF1-206ENST00000531480 TMEM159Q96B96 161 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 PARD6BQ9BYG5 372 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.13□□□□□ -0.15
CPSF1-206ENST00000531480 TWSG1Q9GZX9 223 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 ACBD3Q9H3P7 528 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 PPANQ9NQ55 473 aaKnown RBP14.13□□□□□ -0.15
CPSF1-206ENST00000531480 GALPQ9UBC7 116 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 RAB21Q9UL25 225 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 PSMD13Q9UNM6 376 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 DHRS7Q9Y394 339 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 HEBP2Q9Y5Z4 205 aa14.13□□□□□ -0.15
CPSF1-206ENST00000531480 TRBV23OR9-2A0A075B6M9 112 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 IGHV1OR21-1A0A087WYE8 117 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 A0A1W2PQM1 296 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 FAM221BA6H8Z2 402 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 RHPN2P1A8MT19 583 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 EIF3FO00303 357 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-206ENST00000531480 B4GAT1O43505 415 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 TCEA3O75764 348 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 APOA4P06727 396 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 NDUFS1P28331 727 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 CSE1LP55060 971 aaKnown RBP14.12□□□□□ -0.15
CPSF1-206ENST00000531480 GPLD1P80108 840 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 INSM1Q01101 510 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-206ENST00000531480 BOP1Q14137 746 aaKnown RBP14.12□□□□□ -0.15
CPSF1-206ENST00000531480 KBTBD12Q3ZCT8 623 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 UBAP2Q5T6F2 1119 aaKnown RBP14.12□□□□□ -0.15
CPSF1-206ENST00000531480 EMBQ6PCB8 327 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 CAPN12Q6ZSI9 719 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 OTOAQ7RTW8 1153 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 RASGRP3Q8IV61 690 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 CD200R1Q8TD46 325 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 FBF1Q8TES7 1133 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 CDKL2Q92772 493 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 C12orf66Q96MD2 445 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 SLC30A3Q99726 388 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 CPNE1Q99829 537 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 RHOJQ9H4E5 214 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 EPB41L1Q9H4G0 881 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 STN1Q9H668 368 aaKnown RBP14.12□□□□□ -0.15
CPSF1-206ENST00000531480 ACSS3Q9H6R3 686 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 KIR3DX1Q9H7L2 352 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 MVB12BQ9H7P6 319 aa14.12□□□□□ -0.15
CPSF1-206ENST00000531480 KNTC1P50748 2209 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 PRAMEF33A0A0G2JMD5 474 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 IFRD1O00458 451 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-206ENST00000531480 MATN4O95460 622 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 VIPP01282 170 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 ABHD2P08910 425 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 FAM153BP0C7A2 387 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms