RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ADAMTS17Q8TE56 1095 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 APOL2Q9BQE5 337 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 LUZP4Q9P127 313 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 PCDHGA9Q9Y5G4 932 aaKnown RBP17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 ALG6Q9Y672 507 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 MDC1Q14676 2089 aaKnown RBP17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 CELSR2Q9HCU4 2923 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 CACNA1DQ01668 2161 aa17.93■□□□□ 0.46
SSSCA1-206ENST00000531405 NUP210LQ5VU65 1888 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 MEN1O00255 615 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 KLK3P07288 261 aaPredicted RBP17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 LPOP22079 712 aaPredicted RBP17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 CDH3P22223 829 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 RBL1P28749 1068 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 KRT33BQ14525 404 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 TCEAL1Q15170 157 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 TAF1AQ15573 450 aaPredicted RBP17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 BCL7AQ4VC05 210 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 PRR30Q53SZ7 412 aaPredicted RBP17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 MICALCLQ6ZW33 695 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 VSTM4Q8IW00 320 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 DSELQ8IZU8 1212 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 OR8K5Q8NH50 307 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 ZFPM2Q8WW38 1151 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 CPT1BQ92523 772 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 CLIP3Q96DZ5 547 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 ANP32EQ9BTT0 268 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 HEMGNQ9BXL5 484 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 GBA3Q9H227 469 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 FAM96AQ9H5X1 160 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 LATS2Q9NRM7 1088 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 TRHDEQ9UKU6 1024 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 POMT2Q9UKY4 750 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 SNX7Q9UNH6 387 aa17.92■□□□□ 0.46
SSSCA1-206ENST00000531405 GSAPA4D1B5 854 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 TMEM150CB9EJG8 249 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 CBFA2T2O43439 604 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 SORBS2O94875 1100 aaKnown RBP17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 TPM1P09493 284 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 GEMP55040 296 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 GSDMDP57764 484 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 PRKAA1Q13131 559 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 FHL5Q5TD97 284 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 PAPD7Q5XG87 772 aaKnown RBP17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 KATNAL2Q8IYT4 538 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 CARFQ8N187 725 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 OR13C4Q8NGS5 318 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 OR1L3Q8NH93 324 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 LINC00615Q96LM1 132 aaPredicted RBP17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 LRFN5Q96NI6 719 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 MFRPQ9BY79 579 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 KLHL25Q9H0H3 589 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 FANCEQ9HB96 536 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 CRLS1Q9UJA2 301 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 TCFL5Q9UL49 500 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 INTUQ9ULD6 942 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 TFR2Q9UP52 801 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 MAP4K5Q9Y4K4 846 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 COLEC10Q9Y6Z7 277 aa17.91■□□□□ 0.46
SSSCA1-206ENST00000531405 A6NL46 340 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 C2orf81A6NN90 581 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 HACD1B0YJ81 288 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 H7C0C1 242 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 ZNF185O15231 689 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 SEMA7AO75326 666 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 TMEM63AO94886 807 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 ZRANB2O95218 330 aaKnown RBP eCLIP17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 CAPN1P07384 714 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 RNF224P0DH78 156 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 ST6GAL1P15907 406 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 ADRA1AP35348 466 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 RORAP35398 523 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 ATP5OP48047 213 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 LMAN1P49257 510 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 ITGA1P56199 1179 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 TMPRSS15P98073 1019 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 XIAPP98170 497 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 ZNF789Q5FWF6 425 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 FAM198BQ6UWH4 519 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 RCOR2Q8IZ40 523 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 FDCSPQ8NFU4 85 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 LCN9Q8WX39 176 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 KRT35Q92764 455 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 DCUN1D1Q96GG9 259 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 FERD3LQ96RJ6 166 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 NUDT9Q9BW91 350 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 NLNQ9BYT8 704 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 SRMSQ9H3Y6 488 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 C1GALT1Q9NS00 363 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 PCMTD2Q9NV79 361 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 PLEKHB1Q9UF11 243 aaPredicted RBP17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 MYO9AB2RTY4 2548 aa17.9■□□□□ 0.46
SSSCA1-206ENST00000531405 DOCK10Q96BY6 2186 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 CCDC66A2RUB6 948 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 KLHL33A6NCF5 533 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 BTN3A3O00478 584 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 BTN3A1O00481 513 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 CCL22O00626 93 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 CEACAM4O75871 244 aa17.89■□□□□ 0.45
SSSCA1-206ENST00000531405 ANXA9O76027 345 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms