RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 MROQ9BYG7 248 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 SEMA4CQ9C0C4 833 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 CUEDC2Q9H467 287 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 RMND5AQ9H871 391 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 CAB39LQ9H9S4 337 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 LY9Q9HBG7 655 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 MAGEE1Q9HCI5 957 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 TMEM8AQ9HCN3 771 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 S100A14Q9HCY8 104 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 VPS45Q9NRW7 570 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 GLRX2Q9NS18 164 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 C20orf96Q9NUD7 363 aaPredicted RBP5.57□□□□□ -1.52
CD44-231ENST00000531110 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.57□□□□□ -1.52
CD44-231ENST00000531110 NCKIPSDQ9NZQ3 722 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 PTGFRNQ9P2B2 879 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 TAGLN3Q9UI15 199 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 GLS2Q9UI32 602 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 LNPEPQ9UIQ6 1025 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 PTBP2Q9UKA9 531 aaKnown RBP5.57□□□□□ -1.52
CD44-231ENST00000531110 RCOR1Q9UKL0 485 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 ANGPTL2Q9UKU9 493 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 DIMT1Q9UNQ2 313 aaKnown RBP5.57□□□□□ -1.52
CD44-231ENST00000531110 SESN1Q9Y6P5 492 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 DIP2AQ14689 1571 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 ATP7AQ04656 1500 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 DUOX2Q9NRD8 1548 aa5.57□□□□□ -1.52
CD44-231ENST00000531110 BIVM-ERCC5R4GMW8 1640 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 A0A0U1RQJ8 604 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 ZNF98A6NK75 572 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 POC1B-GALNT4F8VUJ3 575 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 H7C0C1 242 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 WRBO00258 174 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 CES2O00748 559 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 PCDH17O14917 1159 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 SMAD6O43541 496 aaKnown RBP5.56□□□□□ -1.52
CD44-231ENST00000531110 CIAO1O76071 339 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 GLP2RO95838 553 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 PRKCGP05129 697 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 CAPN1P07384 714 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 GALTP07902 379 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 KRT16P08779 473 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 THEGLP0DJG4 465 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 ADRA1DP25100 572 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 RFC1P35251 1148 aaPredicted RBP5.56□□□□□ -1.52
CD44-231ENST00000531110 HSPA7P48741 367 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 POU3F4P49335 361 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 SLC26A2P50443 739 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 ATP12AP54707 1039 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 NR1H2P55055 460 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 KCNJ10P78508 379 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 CDK16Q00536 496 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 SLC10A2Q12908 348 aaPredicted RBP5.56□□□□□ -1.52
CD44-231ENST00000531110 DOC2AQ14183 400 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 GCKRQ14397 625 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 POU6F1Q14863 301 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 SLC39A14Q15043 492 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 OXA1LQ15070 435 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 PPA1Q15181 289 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 SF3B4Q15427 424 aaKnown RBP eCLIP5.56□□□□□ -1.52
CD44-231ENST00000531110 DPYSL2Q16555 572 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 MPEG1Q2M385 716 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 LBHQ53QV2 105 aaPredicted RBP5.56□□□□□ -1.52
CD44-231ENST00000531110 KRTCAP3Q53RY4 240 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 RNASE12Q5GAN4 147 aaKnown RBP5.56□□□□□ -1.52
CD44-231ENST00000531110 EARS2Q5JPH6 523 aaKnown RBP5.56□□□□□ -1.52
CD44-231ENST00000531110 FAM205BPQ63HN1 556 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 ERICH5Q6P6B1 374 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 AAGABQ6PD74 315 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 DPY19L3Q6ZPD9 716 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 C1orf122Q6ZSJ8 110 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 ENOSF1Q7L5Y1 443 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 KRT74Q7RTS7 529 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 NEK8Q86SG6 692 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 TDRPQ86YL5 185 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 LRRC34Q8IZ02 419 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 PYROXD2Q8N2H3 581 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 TCAIMQ8N3R3 496 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 GALNT4Q8N4A0 578 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 METTL25Q8N6Q8 603 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 SRFBP1Q8NEF9 429 aaKnown RBP5.56□□□□□ -1.52
CD44-231ENST00000531110 SLC24A4Q8NFF2 622 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 CEP70Q8NHQ1 597 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 ZNF420Q8TAQ5 688 aaPredicted RBP5.56□□□□□ -1.52
CD44-231ENST00000531110 SCFD2Q8WU76 684 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 ZNF566Q969W8 418 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 ZNF486Q96H40 463 aaPredicted RBP5.56□□□□□ -1.52
CD44-231ENST00000531110 TMEM80Q96HE8 168 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 RUNDC3BQ96NL0 473 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 C17orf62Q9BQA9 187 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 FERMT1Q9BQL6 677 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 NUP85Q9BW27 656 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 C1QTNF7Q9BXJ2 289 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 TEX13BQ9BXU2 312 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 DHX33Q9H6R0 707 aaKnown RBP5.56□□□□□ -1.52
CD44-231ENST00000531110 ZNF696Q9H7X3 374 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 TMEM206Q9H813 350 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 ECT2Q9H8V3 914 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 SAR1AQ9NR31 198 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 GDAP2Q9NXN4 497 aa5.56□□□□□ -1.52
CD44-231ENST00000531110 OR6C2Q9NZP2 312 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms