RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 ALG1LQ6GMV1 187 aa7.15□□□□□ -1.26
CTNND1-229ENST00000531014 C17orf99Q6UX52 265 aa7.15□□□□□ -1.26
CTNND1-229ENST00000531014 CXCL17Q6UXB2 119 aa7.15□□□□□ -1.26
CTNND1-229ENST00000531014 SLC9B2Q86UD5 537 aa7.15□□□□□ -1.26
CTNND1-229ENST00000531014 SKA3Q8IX90 412 aa7.15□□□□□ -1.26
CTNND1-229ENST00000531014 OR56B2PQ8NGI1 322 aa7.15□□□□□ -1.26
CTNND1-229ENST00000531014 AHCYL2Q96HN2 611 aaKnown RBP7.15□□□□□ -1.26
CTNND1-229ENST00000531014 HPDLQ96IR7 371 aa7.15□□□□□ -1.26
CTNND1-229ENST00000531014 KCTD15Q96SI1 283 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-229ENST00000531014 TTLL2Q9BWV7 592 aa7.15□□□□□ -1.26
CTNND1-229ENST00000531014 GJB4Q9NTQ9 266 aa7.15□□□□□ -1.26
CTNND1-229ENST00000531014 TMEM260Q9NX78 707 aa7.15□□□□□ -1.26
CTNND1-229ENST00000531014 PLAGL2Q9UPG8 496 aa7.15□□□□□ -1.26
CTNND1-229ENST00000531014 DOT1LQ8TEK3 1739 aa7.15□□□□□ -1.26
CTNND1-229ENST00000531014 OR6C65A6NJZ3 312 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 CPSF4LA6NMK7 179 aaKnown RBP7.15□□□□□ -1.27
CTNND1-229ENST00000531014 RBAK-RBAKDNI3L0D1 243 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 ATG13O75143 517 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 ASGR1P07306 291 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 HCKP08631 526 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 MGAT1P26572 445 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 PTPN9P43378 593 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 NAE1Q13564 534 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 CUL2Q13617 745 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 EIF2B1Q14232 305 aaKnown RBP7.15□□□□□ -1.27
CTNND1-229ENST00000531014 PFKFB4Q16877 469 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 ZNF674Q2M3X9 581 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 SLC9B1Q4ZJI4 515 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 KLHL22Q53GT1 634 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 ATXN7L2Q5T6C5 722 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-229ENST00000531014 RETSATQ6NUM9 610 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 FAM199XQ6PEV8 388 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-229ENST00000531014 PIWIL4Q7Z3Z4 852 aaKnown RBP7.15□□□□□ -1.27
CTNND1-229ENST00000531014 MCEMP1Q8IX19 187 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 ACTL9Q8TC94 416 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 SMARCD2Q92925 531 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 OTUB2Q96DC9 234 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 TXN2Q99757 166 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 CIB1Q99828 191 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 GAL3ST1Q99999 423 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 TMEM246Q9BRR3 403 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 SPG21Q9NZD8 308 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 MTRRQ9UBK8 725 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 EGFL7Q9UHF1 273 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 RAP2CQ9Y3L5 183 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 ZNF175Q9Y473 711 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 PCDHGB2Q9Y5G2 931 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 U3KQV3 271 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 TNFRSF11BO00300 401 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 PCDH8O95206 1070 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 PLEKP08567 350 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-229ENST00000531014 ANXA3P12429 323 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 GZMAP12544 262 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 ITPKBP27987 946 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 SSTR1P30872 391 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 RYKP34925 604 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 NCS1P62166 190 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 RNF4P78317 190 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 EEF1A2Q05639 463 aaKnown RBP7.15□□□□□ -1.27
CTNND1-229ENST00000531014 SLC13A2Q13183 592 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 SGCGQ13326 291 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 ADAM15Q13444 863 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 SPIN3Q5JUX0 258 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 C6orf52Q5T4I8 152 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 C3orf33Q6P1S2 294 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 FBXO16Q8IX29 292 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-229ENST00000531014 TMEM192Q8IY95 271 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 PTGR2Q8N8N7 351 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-229ENST00000531014 BSNDQ8WZ55 320 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 C7orf34Q96L11 122 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 TMEM47Q9BQJ4 181 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 NSUN3Q9H649 340 aaKnown RBP7.15□□□□□ -1.27
CTNND1-229ENST00000531014 RANBP3Q9H6Z4 567 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-229ENST00000531014 KCNQ5Q9NR82 932 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 PCDHB16Q9NRJ7 776 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 HCN3Q9P1Z3 774 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 PRDM4Q9UKN5 801 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 PCDHGA8Q9Y5G5 932 aa7.15□□□□□ -1.27
CTNND1-229ENST00000531014 NRCAMQ92823 1304 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 PSMD9O00233 223 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 FAM86B2P0C5J1 330 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 CYP3A5P20815 502 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 ACO1P21399 889 aaKnown RBP7.14□□□□□ -1.27
CTNND1-229ENST00000531014 ADH6P28332 368 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 OR1G1P47890 313 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 FABP6P51161 128 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 NRLP54845 237 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 CDH13P55290 713 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 E2F1Q01094 437 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 PCBP1Q15365 356 aaKnown RBP eCLIP7.14□□□□□ -1.274e-9■■■□□ 19
CTNND1-229ENST00000531014 CNPY1Q3B7I2 92 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 PPP1R15BQ5SWA1 713 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 TAPT1Q6NXT6 567 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 MSANTD2Q6P1R3 559 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 C3orf67Q6ZVT6 689 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 PDZD9Q8IXQ8 264 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 RBM12BQ8IXT5 1001 aaKnown RBP7.14□□□□□ -1.27
CTNND1-229ENST00000531014 PNLDC1Q8NA58 520 aaKnown RBP7.14□□□□□ -1.27
CTNND1-229ENST00000531014 OR2T34Q8NGX1 318 aa7.14□□□□□ -1.27
CTNND1-229ENST00000531014 OR2T3Q8NH03 318 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms