RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 SOX8P57073 446 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 CDC16Q13042 620 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 AIMP2Q13155 320 aaKnown RBP10.13□□□□□ -0.79
COPB1-207ENST00000529866 NFE2L1Q14494 772 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 KRT33BQ14525 404 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 PAFAH1B3Q15102 231 aaKnown RBP10.13□□□□□ -0.79
COPB1-207ENST00000529866 ATP13A5Q4VNC0 1218 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 LDLRAP1Q5SW96 308 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 FAM182AQ5T1J6 154 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 MLIPQ5VWP3 458 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 B3GNTL1Q67FW5 361 aaPredicted RBP10.13□□□□□ -0.79
COPB1-207ENST00000529866 FCRL6Q6DN72 434 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 CCDC70Q6NSX1 233 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 FAM180AQ6UWF9 173 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 B4GALNT4Q76KP1 1039 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 NXPE1Q8N323 547 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 CCNYQ8ND76 341 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 LRRN4Q8WUT4 740 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 N4BP2L2Q92802 583 aaPredicted RBP10.13□□□□□ -0.79
COPB1-207ENST00000529866 ATP13A2Q9NQ11 1180 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 P4HTMQ9NXG6 502 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 SUCOQ9UBS9 1254 aaKnown RBP10.13□□□□□ -0.79
COPB1-207ENST00000529866 NDOR1Q9UHB4 597 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 SLC24A2Q9UI40 661 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 ITGB1BP2Q9UKP3 347 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 PTRH2Q9Y3E5 179 aaKnown RBP10.13□□□□□ -0.79
COPB1-207ENST00000529866 CFAP20Q9Y6A4 193 aaKnown RBP10.13□□□□□ -0.79
COPB1-207ENST00000529866 DNMT3AQ9Y6K1 912 aaPredicted RBP10.13□□□□□ -0.79
COPB1-207ENST00000529866 COLEC10Q9Y6Z7 277 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 SEC16AO15027 2179 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 CNTRLQ7Z7A1 2325 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 PKDREJQ9NTG1 2253 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 AKAP9Q99996 3911 aa10.13□□□□□ -0.79
COPB1-207ENST00000529866 DDX3YO15523 660 aaKnown RBP10.12□□□□□ -0.79
COPB1-207ENST00000529866 ZNF749O43361 778 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 MMP2P08253 660 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 POLR2CP19387 275 aaPredicted RBP10.12□□□□□ -0.79
COPB1-207ENST00000529866 PBLDP30039 288 aaPredicted RBP10.12□□□□□ -0.79
COPB1-207ENST00000529866 SSR1P43307 286 aaKnown RBP10.12□□□□□ -0.79
COPB1-207ENST00000529866 ARSEP51690 589 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 ZNF169Q14929 603 aaPredicted RBP10.12□□□□□ -0.79
COPB1-207ENST00000529866 TLR1Q15399 786 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 HADHQ16836 314 aaKnown RBP10.12□□□□□ -0.79
COPB1-207ENST00000529866 LONRF2Q1L5Z9 754 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 ATP13A4Q4VNC1 1196 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 ZNF789Q5FWF6 425 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 FBXO38Q6PIJ6 1188 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 SPOCD1Q6ZMY3 1216 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 FAM83HQ6ZRV2 1179 aaPredicted RBP10.12□□□□□ -0.79
COPB1-207ENST00000529866 PARP9Q8IXQ6 854 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 BCORP1Q8N888 145 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 NIPA2Q8N8Q9 360 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 OR2Y1Q8NGV0 311 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 DNAJB14Q8TBM8 379 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 PROKR1Q8TCW9 393 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 CPLX3Q8WVH0 158 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 HDAC11Q96DB2 347 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 CNDP1Q96KN2 507 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 PPM1MQ96MI6 270 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 TRIB3Q96RU7 358 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 ZNF670Q9BS34 389 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 EPS8L2Q9H6S3 715 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 OLAHQ9NV23 265 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 IP6K2Q9UHH9 426 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 ANAPC7Q9UJX3 599 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 ACSL5Q9ULC5 683 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 HEBP2Q9Y5Z4 205 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 AP1M2Q9Y6Q5 423 aa10.12□□□□□ -0.79
COPB1-207ENST00000529866 NAV3Q8IVL0 2385 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 SVILO95425 2214 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 CROCCQ5TZA2 2017 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 OR2AG2A6NM03 316 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 AGPSO00116 658 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 KCNK1O00180 336 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 CYP1A2P05177 515 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 PYGMP11217 842 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 GJC1P36383 396 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 TNNT3P45378 269 aaPredicted RBP10.11□□□□□ -0.79
COPB1-207ENST00000529866 LMAN1P49257 510 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 CTSCP53634 463 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 TAS2R40P59535 323 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 IFI35P80217 286 aaPredicted RBP10.11□□□□□ -0.79
COPB1-207ENST00000529866 GSE1Q14687 1217 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 PPP2R5EQ16537 467 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 PCSK7Q16549 785 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 HIF1AQ16665 826 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 VWA2Q5GFL6 755 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 AGAP7PQ5VUJ5 663 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 METRNLQ641Q3 311 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 ZNF385CQ66K41 422 aaPredicted RBP10.11□□□□□ -0.79
COPB1-207ENST00000529866 DUS1LQ6P1R4 473 aaKnown RBP10.11□□□□□ -0.79
COPB1-207ENST00000529866 MTFR2Q6P444 385 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 BNC2Q6ZN30 1099 aaPredicted RBP10.11□□□□□ -0.79
COPB1-207ENST00000529866 NT5DC3Q86UY8 548 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 MAP7D3Q8IWC1 876 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 RASGEF1AQ8N9B8 481 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 DDHD1Q8NEL9 900 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 OR4E2Q8NGC2 313 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 FAM71BQ8TC56 605 aa10.11□□□□□ -0.79
COPB1-207ENST00000529866 DTX3LQ8TDB6 740 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms