RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 A0A1W2PP55 124 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 H7C0S8 307 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 CFLARO15519 480 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 TRMUO75648 421 aaKnown RBP14.35□□□□□ -0.11
NR1H3-231ENST00000529540 PSMA3P25788 255 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 CXCL12P48061 93 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 CDK9P50750 372 aaKnown RBP14.35□□□□□ -0.11
NR1H3-231ENST00000529540 EMP3P54852 163 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 TUBA4AP68366 448 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 PRAMEP78395 509 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 GAS6Q14393 721 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 SMAD1Q15797 465 aaKnown RBP14.35□□□□□ -0.11
NR1H3-231ENST00000529540 POM121L1PQ3SYA9 428 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 TMEM52BQ4KMG9 183 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 AGBL4Q5VU57 503 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 LRRC8EQ6NSJ5 796 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 CRTC1Q6UUV9 634 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 LYSMD3Q7Z3D4 306 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 ZC3HC1Q86WB0 502 aaKnown RBP14.35□□□□□ -0.11
NR1H3-231ENST00000529540 ERI1Q8IV48 349 aaKnown RBP14.35□□□□□ -0.11
NR1H3-231ENST00000529540 PELI3Q8N2H9 469 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 PGBD3Q8N328 593 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 MDGA1Q8NFP4 955 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 CALML6Q8TD86 181 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 CXorf40AQ8TE69 158 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 HMGB4Q8WW32 186 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 DNAJC1Q96KC8 554 aaKnown RBP14.35□□□□□ -0.11
NR1H3-231ENST00000529540 BIRC8Q96P09 236 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 SGK2Q9HBY8 427 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 IARS2Q9NSE4 1012 aaKnown RBP14.35□□□□□ -0.11
NR1H3-231ENST00000529540 TREX1Q9NSU2 369 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 C20orf96Q9NUD7 363 aaPredicted RBP14.35□□□□□ -0.11
NR1H3-231ENST00000529540 RSL24D1Q9UHA3 163 aaKnown RBP14.35□□□□□ -0.11
NR1H3-231ENST00000529540 RNF11Q9Y3C5 154 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 SPO11Q9Y5K1 396 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 ARL5AQ9Y689 179 aa14.35□□□□□ -0.11
NR1H3-231ENST00000529540 A0A0J9YVX5 310 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 TMEM221A6NGB7 291 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 M0R296 226 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 TK2O00142 265 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 SDHDO14521 159 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 PLRG1O43660 514 aaKnown RBP14.34□□□□□ -0.11
NR1H3-231ENST00000529540 RPP40O75818 363 aaKnown RBP14.34□□□□□ -0.11
NR1H3-231ENST00000529540 IGLV3-19P01714 112 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 PIRTP0C851 137 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 ZNF140P52738 457 aaPredicted RBP14.34□□□□□ -0.11
NR1H3-231ENST00000529540 DCDC1P59894 354 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 DNAJB13P59910 316 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 PSME3P61289 254 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 PTK2BQ14289 1009 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 CDKN3Q16667 212 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 KIAA1161Q6NSJ0 714 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 DHRS4L2Q6PKH6 230 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.34□□□□□ -0.11
NR1H3-231ENST00000529540 CHSY3Q70JA7 882 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 AMIGO2Q86SJ2 522 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 RBM12BQ8IXT5 1001 aaKnown RBP14.34□□□□□ -0.11
NR1H3-231ENST00000529540 NRSN1Q8IZ57 195 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 GALNT4Q8N4A0 578 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 TTC30BQ8N4P2 665 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 ACVR1CQ8NER5 493 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 TSPAN14Q8NG11 270 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 HM13Q8TCT9 377 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 AGR3Q8TD06 166 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 MFSD3Q96ES6 412 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 FAR2Q96K12 515 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 PLEKHG4BQ96PX9 1271 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 ITM2CQ9NQX7 267 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 CHCHD3Q9NX63 227 aaKnown RBP14.34□□□□□ -0.11
NR1H3-231ENST00000529540 IL17CQ9P0M4 197 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 USP36Q9P275 1121 aaKnown RBP14.34□□□□□ -0.11
NR1H3-231ENST00000529540 NFKBIL1Q9UBC1 381 aaPredicted RBP14.34□□□□□ -0.11
NR1H3-231ENST00000529540 EBF1Q9UH73 591 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 SLC39A10Q9ULF5 831 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 PCDHGA7Q9Y5G6 932 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 FADS3Q9Y5Q0 445 aa14.34□□□□□ -0.11
NR1H3-231ENST00000529540 TCRBV3S1A0A5B6 114 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 H3BNH8 94 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 PFDN6O15212 129 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 CLDN7O95471 211 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 H6PDO95479 791 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 SLC35E2BP0CK96 405 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 STC1P52823 247 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 NAGLUP54802 743 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 MTAPQ13126 283 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 TRIM25Q14258 630 aaKnown RBP14.33□□□□□ -0.11
NR1H3-231ENST00000529540 IL23RQ5VWK5 629 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 TMEM198Q66K66 360 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 NXNQ6DKJ4 435 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 AFTPHQ6ULP2 937 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 CYP2U1Q7Z449 544 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 CACUL1Q86Y37 369 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 CNTN4Q8IWV2 1026 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 OR4K2Q8NGD2 314 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.33□□□□□ -0.112e-6■■■■■ 54.9
NR1H3-231ENST00000529540 SCYL1Q96KG9 808 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 C1QTNF7Q9BXJ2 289 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 BTBD1Q9H0C5 482 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 PNPLA3Q9NST1 481 aa14.33□□□□□ -0.11
NR1H3-231ENST00000529540 DNAAF2Q9NVR5 837 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms