RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 SCN3BQ9NY72 215 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 ENPP5Q9UJA9 477 aa17.64■□□□□ 0.41
LTBP3-210ENST00000528516 LTBP3Q9NS15 1303 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 C5orf58C9J3I9 102 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 STBD1O95210 358 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 FYNP06241 537 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 KRT6CP48668 564 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 MTPNP58546 118 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 RBM48Q5RL73 367 aaKnown RBP17.63■□□□□ 0.41
LTBP3-210ENST00000528516 CLDN19Q8N6F1 224 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 ZNF641Q96N77 438 aaPredicted RBP17.63■□□□□ 0.41
LTBP3-210ENST00000528516 MGAT4DA6NG13 374 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 FGF10O15520 208 aaPredicted RBP17.63■□□□□ 0.41
LTBP3-210ENST00000528516 CRHBPP24387 322 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 CD40LGP29965 261 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 MTHFRP42898 656 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 CRY1Q16526 586 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 C6orf141Q5SZD1 244 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 PAQR3Q6TCH7 311 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 MON1AQ86VX9 555 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 CEP97Q8IW35 865 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 DEPDC4Q8N2C3 294 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 NPWQ8N729 165 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 LEMD2Q8NC56 503 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 MCOLN3Q8TDD5 553 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 HOXD1Q9GZZ0 328 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 ATG10Q9H0Y0 220 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 SLC22A1O15245 554 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 PRKG2Q13237 762 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 MRPS31Q92665 395 aaKnown RBP17.63■□□□□ 0.41
LTBP3-210ENST00000528516 OMA1Q96E52 524 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 AKTIPQ9H8T0 292 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 NMUR1Q9HB89 426 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 GALPQ9UBC7 116 aa17.63■□□□□ 0.41
LTBP3-210ENST00000528516 AGO1Q9UL18 857 aaKnown RBP17.63■□□□□ 0.41
LTBP3-210ENST00000528516 ZCWPW2A0A1B0GU75 182 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 G3V2T6 193 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 NIPSNAP2O75323 286 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 ZNF7P17097 686 aaPredicted RBP17.62■□□□□ 0.41
LTBP3-210ENST00000528516 ENDOUP21128 410 aaKnown RBP17.62■□□□□ 0.41
LTBP3-210ENST00000528516 MAP2K4P45985 399 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 LRIT3Q3SXY7 679 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 DESI1Q6ICB0 168 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 PRSS55Q6UWB4 352 aaPredicted RBP17.62■□□□□ 0.41
LTBP3-210ENST00000528516 SPRED1Q7Z699 444 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 PPP1R2P1Q96PQ5 205 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 TNKS2Q9H2K2 1166 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 OSGEPL1Q9H4B0 414 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 AMBNQ9NP70 447 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 AKIP1Q9NQ31 210 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 EIF2B3Q9NR50 452 aaKnown RBP17.62■□□□□ 0.41
LTBP3-210ENST00000528516 UGT2A1Q9Y4X1 527 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 PCDHGA8Q9Y5G5 932 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 NUP214P35658 2090 aaPredicted RBP17.62■□□□□ 0.41
LTBP3-210ENST00000528516 TBL1XO60907 577 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 SNAI1O95863 264 aaPredicted RBP17.62■□□□□ 0.41
LTBP3-210ENST00000528516 ITPKAP23677 461 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 S100A3P33764 101 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 ATXN7L2Q5T6C5 722 aaPredicted RBP17.62■□□□□ 0.41
LTBP3-210ENST00000528516 GPRIN3Q6ZVF9 776 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 RFPL4BQ6ZWI9 263 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 COMMD8Q9NX08 183 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 FKBPLQ9UIM3 349 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 F8W810 466 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 KPNA3O00505 521 aaPredicted RBP17.62■□□□□ 0.41
LTBP3-210ENST00000528516 ALDH1A1P00352 501 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 KCNQ1P51787 676 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 BCL2L1Q07817 233 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 LAPTM5Q13571 262 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 INTS6LQ5JSJ4 861 aaKnown RBP17.62■□□□□ 0.41
LTBP3-210ENST00000528516 GLYATQ6IB77 296 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 OR8H2Q8N162 312 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 PYCR2Q96C36 320 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 BIRC7Q96CA5 298 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 TMEM246Q9BRR3 403 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 RPRD1BQ9NQG5 326 aaKnown RBP17.62■□□□□ 0.41
LTBP3-210ENST00000528516 ITM2BQ9Y287 266 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 PTCH2Q9Y6C5 1203 aa17.62■□□□□ 0.41
LTBP3-210ENST00000528516 BBIP1A8MTZ0 92 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 ACOX3O15254 700 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 ULK1O75385 1050 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 CAPN3P20807 821 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 TRIP4Q15650 581 aaPredicted RBP17.61■□□□□ 0.41
LTBP3-210ENST00000528516 CCDC58Q4VC31 144 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 SNAP47Q5SQN1 464 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 XAF1Q6GPH4 301 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 ARRDC4Q8NCT1 418 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 HMGCLL1Q8TB92 370 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 SLC30A3Q99726 388 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 CENPOQ9BU64 300 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 ZDHHC6Q9H6R6 413 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 EVLQ9UI08 416 aaPredicted RBP17.61■□□□□ 0.41
LTBP3-210ENST00000528516 UGT2B11O75310 529 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 C1RP00736 705 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 DGKQP52824 942 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 RACK1P63244 317 aaKnown RBP17.61■□□□□ 0.41
LTBP3-210ENST00000528516 LCN8Q6JVE9 175 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 ZCCHC8Q6NZY4 707 aaKnown RBP17.61■□□□□ 0.41
LTBP3-210ENST00000528516 CRYBG2Q8N1P7 616 aa17.61■□□□□ 0.41
LTBP3-210ENST00000528516 CNDP2Q96KP4 475 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms